Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A13Q9NSD5 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A13Q9NSD5 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A13Q9NSD5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A13Q9NSD5 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SLC6A13Q9NSD5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A13Q9NSD5 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.78■□□□□ 0.76
SLC6A13Q9NSD5 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.78■□□□□ 0.76
SLC6A13Q9NSD5 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.78■□□□□ 0.76
SLC6A13Q9NSD5 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC6A13Q9NSD5 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A13Q9NSD5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SLC6A13Q9NSD5 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SLC6A13Q9NSD5 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.78■□□□□ 0.76
SLC6A13Q9NSD5 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A13Q9NSD5 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A13Q9NSD5 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
SLC6A13Q9NSD5 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.77■□□□□ 0.76
SLC6A13Q9NSD5 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A13Q9NSD5 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A13Q9NSD5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A13Q9NSD5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A13Q9NSD5 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SLC6A13Q9NSD5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.76■□□□□ 0.75
SLC6A13Q9NSD5 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SLC6A13Q9NSD5 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A13Q9NSD5 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SLC6A13Q9NSD5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A13Q9NSD5 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A13Q9NSD5 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.76■□□□□ 0.75
SLC6A13Q9NSD5 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.76■□□□□ 0.75
SLC6A13Q9NSD5 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC6A13Q9NSD5 AC099791.1-201ENST00000416440 715 ntBASIC19.76■□□□□ 0.75
SLC6A13Q9NSD5 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.76■□□□□ 0.75
SLC6A13Q9NSD5 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SLC6A13Q9NSD5 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A13Q9NSD5 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SLC6A13Q9NSD5 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A13Q9NSD5 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.76■□□□□ 0.75
SLC6A13Q9NSD5 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A13Q9NSD5 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
SLC6A13Q9NSD5 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
SLC6A13Q9NSD5 AC009237.3-201ENST00000393279 1427 ntBASIC19.76■□□□□ 0.75
SLC6A13Q9NSD5 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.76■□□□□ 0.75
SLC6A13Q9NSD5 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A13Q9NSD5 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A13Q9NSD5 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A13Q9NSD5 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.75■□□□□ 0.75
SLC6A13Q9NSD5 AC005224.4-201ENST00000583262 1652 ntBASIC19.75■□□□□ 0.75
SLC6A13Q9NSD5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A13Q9NSD5 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.75■□□□□ 0.75
SLC6A13Q9NSD5 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A13Q9NSD5 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.75■□□□□ 0.75
SLC6A13Q9NSD5 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.75■□□□□ 0.75
SLC6A13Q9NSD5 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.75■□□□□ 0.75
SLC6A13Q9NSD5 AC131212.1-201ENST00000613771 668 ntBASIC19.75■□□□□ 0.75
SLC6A13Q9NSD5 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.75■□□□□ 0.75
SLC6A13Q9NSD5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A13Q9NSD5 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A13Q9NSD5 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A13Q9NSD5 AL391422.3-201ENST00000603791 2761 ntBASIC19.75■□□□□ 0.75
SLC6A13Q9NSD5 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SLC6A13Q9NSD5 TSPY26P-201ENST00000476365 1326 ntBASIC19.75■□□□□ 0.75
SLC6A13Q9NSD5 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SLC6A13Q9NSD5 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SLC6A13Q9NSD5 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A13Q9NSD5 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A13Q9NSD5 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A13Q9NSD5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SLC6A13Q9NSD5 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A13Q9NSD5 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SLC6A13Q9NSD5 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.74■□□□□ 0.75
SLC6A13Q9NSD5 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.74■□□□□ 0.75
SLC6A13Q9NSD5 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.74■□□□□ 0.75
SLC6A13Q9NSD5 AC105233.4-201ENST00000642045 216 ntBASIC19.74■□□□□ 0.75
SLC6A13Q9NSD5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC6A13Q9NSD5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A13Q9NSD5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A13Q9NSD5 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A13Q9NSD5 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC6A13Q9NSD5 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A13Q9NSD5 GABARAPL3-202ENST00000624044 1851 ntBASIC19.73■□□□□ 0.75
SLC6A13Q9NSD5 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A13Q9NSD5 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A13Q9NSD5 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SLC6A13Q9NSD5 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SLC6A13Q9NSD5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A13Q9NSD5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A13Q9NSD5 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SLC6A13Q9NSD5 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.73■□□□□ 0.75
SLC6A13Q9NSD5 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A13Q9NSD5 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
SLC6A13Q9NSD5 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.73■□□□□ 0.75
SLC6A13Q9NSD5 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.73■□□□□ 0.75
SLC6A13Q9NSD5 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
SLC6A13Q9NSD5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SLC6A13Q9NSD5 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SLC6A13Q9NSD5 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC6A13Q9NSD5 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
SLC6A13Q9NSD5 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms