Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.66■□□□□ 0.74
KLHL1Q9NR64 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.66■□□□□ 0.74
KLHL1Q9NR64 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KLHL1Q9NR64 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KLHL1Q9NR64 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.66■□□□□ 0.74
KLHL1Q9NR64 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.66■□□□□ 0.74
KLHL1Q9NR64 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KLHL1Q9NR64 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KLHL1Q9NR64 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.66■□□□□ 0.74
KLHL1Q9NR64 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KLHL1Q9NR64 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.66■□□□□ 0.74
KLHL1Q9NR64 AL024507.2-201ENST00000606070 2574 ntBASIC19.66■□□□□ 0.74
KLHL1Q9NR64 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KLHL1Q9NR64 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KLHL1Q9NR64 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
KLHL1Q9NR64 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
KLHL1Q9NR64 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KLHL1Q9NR64 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.65■□□□□ 0.74
KLHL1Q9NR64 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KLHL1Q9NR64 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.65■□□□□ 0.74
KLHL1Q9NR64 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KLHL1Q9NR64 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.65■□□□□ 0.74
KLHL1Q9NR64 HLA-L-209ENST00000420110 1011 ntBASIC19.65■□□□□ 0.74
KLHL1Q9NR64 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.65■□□□□ 0.74
KLHL1Q9NR64 AC011767.1-201ENST00000617410 1153 ntBASIC19.65■□□□□ 0.74
KLHL1Q9NR64 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KLHL1Q9NR64 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KLHL1Q9NR64 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
KLHL1Q9NR64 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
KLHL1Q9NR64 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
KLHL1Q9NR64 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
KLHL1Q9NR64 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.64■□□□□ 0.73
KLHL1Q9NR64 KRT18P11-201ENST00000435214 1283 ntBASIC19.64■□□□□ 0.73
KLHL1Q9NR64 AC026185.1-201ENST00000445748 174 ntBASIC19.64■□□□□ 0.73
KLHL1Q9NR64 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
KLHL1Q9NR64 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
KLHL1Q9NR64 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KLHL1Q9NR64 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.64■□□□□ 0.73
KLHL1Q9NR64 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
KLHL1Q9NR64 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KLHL1Q9NR64 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KLHL1Q9NR64 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KLHL1Q9NR64 FBXW4P1-201ENST00000426721 2239 ntBASIC19.64■□□□□ 0.73
KLHL1Q9NR64 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
KLHL1Q9NR64 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.63■□□□□ 0.73
KLHL1Q9NR64 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KLHL1Q9NR64 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KLHL1Q9NR64 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KLHL1Q9NR64 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
KLHL1Q9NR64 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.63■□□□□ 0.73
KLHL1Q9NR64 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.63■□□□□ 0.73
KLHL1Q9NR64 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.63■□□□□ 0.73
KLHL1Q9NR64 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.63■□□□□ 0.73
KLHL1Q9NR64 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.63■□□□□ 0.73
KLHL1Q9NR64 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KLHL1Q9NR64 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
KLHL1Q9NR64 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KLHL1Q9NR64 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.63■□□□□ 0.73
KLHL1Q9NR64 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KLHL1Q9NR64 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
KLHL1Q9NR64 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
KLHL1Q9NR64 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KLHL1Q9NR64 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
KLHL1Q9NR64 AC055733.4-201ENST00000638462 1354 ntBASIC19.62■□□□□ 0.73
KLHL1Q9NR64 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KLHL1Q9NR64 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.62■□□□□ 0.73
KLHL1Q9NR64 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KLHL1Q9NR64 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KLHL1Q9NR64 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.62■□□□□ 0.73
KLHL1Q9NR64 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KLHL1Q9NR64 RAP2CP1-201ENST00000605103 478 ntBASIC19.62■□□□□ 0.73
KLHL1Q9NR64 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.62■□□□□ 0.73
KLHL1Q9NR64 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KLHL1Q9NR64 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
KLHL1Q9NR64 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
KLHL1Q9NR64 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.61■□□□□ 0.73
KLHL1Q9NR64 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
KLHL1Q9NR64 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KLHL1Q9NR64 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KLHL1Q9NR64 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.61■□□□□ 0.73
KLHL1Q9NR64 AC006970.2-201ENST00000450065 779 ntBASIC19.61■□□□□ 0.73
KLHL1Q9NR64 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.61■□□□□ 0.73
KLHL1Q9NR64 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.61■□□□□ 0.73
KLHL1Q9NR64 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.61■□□□□ 0.73
KLHL1Q9NR64 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.61■□□□□ 0.73
KLHL1Q9NR64 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.61■□□□□ 0.73
KLHL1Q9NR64 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
KLHL1Q9NR64 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KLHL1Q9NR64 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.61■□□□□ 0.73
KLHL1Q9NR64 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.61■□□□□ 0.73
KLHL1Q9NR64 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KLHL1Q9NR64 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.61■□□□□ 0.73
KLHL1Q9NR64 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KLHL1Q9NR64 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.61■□□□□ 0.73
KLHL1Q9NR64 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
KLHL1Q9NR64 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
KLHL1Q9NR64 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KLHL1Q9NR64 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KLHL1Q9NR64 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KLHL1Q9NR64 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms