Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.04■□□□□ 0.8
NECTIN3Q9NQS3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.04■□□□□ 0.8
NECTIN3Q9NQS3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NECTIN3Q9NQS3 KRT18P61-201ENST00000585825 1298 ntBASIC20.04■□□□□ 0.8
NECTIN3Q9NQS3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.04■□□□□ 0.8
NECTIN3Q9NQS3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NECTIN3Q9NQS3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.04■□□□□ 0.8
NECTIN3Q9NQS3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NECTIN3Q9NQS3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
NECTIN3Q9NQS3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
NECTIN3Q9NQS3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.04■□□□□ 0.8
NECTIN3Q9NQS3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NECTIN3Q9NQS3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NECTIN3Q9NQS3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NECTIN3Q9NQS3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NECTIN3Q9NQS3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.04■□□□□ 0.8
NECTIN3Q9NQS3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.04■□□□□ 0.8
NECTIN3Q9NQS3 AC026471.6-201ENST00000622954 1905 ntBASIC20.04■□□□□ 0.8
NECTIN3Q9NQS3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NECTIN3Q9NQS3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
NECTIN3Q9NQS3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
NECTIN3Q9NQS3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NECTIN3Q9NQS3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NECTIN3Q9NQS3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
NECTIN3Q9NQS3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NECTIN3Q9NQS3 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.03■□□□□ 0.8
NECTIN3Q9NQS3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NECTIN3Q9NQS3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.03■□□□□ 0.8
NECTIN3Q9NQS3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NECTIN3Q9NQS3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.03■□□□□ 0.8
NECTIN3Q9NQS3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NECTIN3Q9NQS3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NECTIN3Q9NQS3 FAM99A-202ENST00000538190 1989 ntBASIC20.03■□□□□ 0.8
NECTIN3Q9NQS3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NECTIN3Q9NQS3 AC004854.2-201ENST00000608450 1441 ntBASIC20.02■□□□□ 0.8
NECTIN3Q9NQS3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
NECTIN3Q9NQS3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
NECTIN3Q9NQS3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.02■□□□□ 0.8
NECTIN3Q9NQS3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
NECTIN3Q9NQS3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NECTIN3Q9NQS3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NECTIN3Q9NQS3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.02■□□□□ 0.8
NECTIN3Q9NQS3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.02■□□□□ 0.8
NECTIN3Q9NQS3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NECTIN3Q9NQS3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.02■□□□□ 0.8
NECTIN3Q9NQS3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NECTIN3Q9NQS3 AP004607.4-201ENST00000530158 1459 ntBASIC20.02■□□□□ 0.8
NECTIN3Q9NQS3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NECTIN3Q9NQS3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.02■□□□□ 0.8
NECTIN3Q9NQS3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.02■□□□□ 0.79
NECTIN3Q9NQS3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
NECTIN3Q9NQS3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NECTIN3Q9NQS3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
NECTIN3Q9NQS3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NECTIN3Q9NQS3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NECTIN3Q9NQS3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NECTIN3Q9NQS3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NECTIN3Q9NQS3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
NECTIN3Q9NQS3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
NECTIN3Q9NQS3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.01■□□□□ 0.79
NECTIN3Q9NQS3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.01■□□□□ 0.79
NECTIN3Q9NQS3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.01■□□□□ 0.79
NECTIN3Q9NQS3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NECTIN3Q9NQS3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NECTIN3Q9NQS3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NECTIN3Q9NQS3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NECTIN3Q9NQS3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NECTIN3Q9NQS3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
NECTIN3Q9NQS3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NECTIN3Q9NQS3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NECTIN3Q9NQS3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20■□□□□ 0.79
NECTIN3Q9NQS3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NECTIN3Q9NQS3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
NECTIN3Q9NQS3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20■□□□□ 0.79
NECTIN3Q9NQS3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NECTIN3Q9NQS3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20■□□□□ 0.79
NECTIN3Q9NQS3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NECTIN3Q9NQS3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NECTIN3Q9NQS3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NECTIN3Q9NQS3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20■□□□□ 0.79
NECTIN3Q9NQS3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
NECTIN3Q9NQS3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20■□□□□ 0.79
NECTIN3Q9NQS3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20■□□□□ 0.79
NECTIN3Q9NQS3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20■□□□□ 0.79
NECTIN3Q9NQS3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NECTIN3Q9NQS3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NECTIN3Q9NQS3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NECTIN3Q9NQS3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20■□□□□ 0.79
NECTIN3Q9NQS3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
NECTIN3Q9NQS3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20■□□□□ 0.79
NECTIN3Q9NQS3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20■□□□□ 0.79
NECTIN3Q9NQS3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20■□□□□ 0.79
NECTIN3Q9NQS3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20■□□□□ 0.79
NECTIN3Q9NQS3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20■□□□□ 0.79
NECTIN3Q9NQS3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NECTIN3Q9NQS3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
NECTIN3Q9NQS3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NECTIN3Q9NQS3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NECTIN3Q9NQS3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NECTIN3Q9NQS3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms