Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 REXO2-208ENST00000539754 791 ntTSL 2 BASIC24.17■■□□□ 1.46
ZFYVE28Q9HCC9 BX088651.1-201ENST00000540551 451 ntBASIC24.17■■□□□ 1.46
ZFYVE28Q9HCC9 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
ZFYVE28Q9HCC9 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
ZFYVE28Q9HCC9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC24.17■■□□□ 1.46
ZFYVE28Q9HCC9 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
ZFYVE28Q9HCC9 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
ZFYVE28Q9HCC9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
ZFYVE28Q9HCC9 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
ZFYVE28Q9HCC9 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
ZFYVE28Q9HCC9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
ZFYVE28Q9HCC9 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
ZFYVE28Q9HCC9 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC24.16■■□□□ 1.46
ZFYVE28Q9HCC9 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ZFYVE28Q9HCC9 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
ZFYVE28Q9HCC9 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC24.16■■□□□ 1.46
ZFYVE28Q9HCC9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC24.16■■□□□ 1.46
ZFYVE28Q9HCC9 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC24.16■■□□□ 1.46
ZFYVE28Q9HCC9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC24.16■■□□□ 1.46
ZFYVE28Q9HCC9 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ZFYVE28Q9HCC9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
ZFYVE28Q9HCC9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC24.15■■□□□ 1.46
ZFYVE28Q9HCC9 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ZFYVE28Q9HCC9 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ZFYVE28Q9HCC9 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ZFYVE28Q9HCC9 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC24.15■■□□□ 1.46
ZFYVE28Q9HCC9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC24.15■■□□□ 1.46
ZFYVE28Q9HCC9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.15■■□□□ 1.46
ZFYVE28Q9HCC9 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ZFYVE28Q9HCC9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
ZFYVE28Q9HCC9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
ZFYVE28Q9HCC9 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
ZFYVE28Q9HCC9 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC24.14■■□□□ 1.46
ZFYVE28Q9HCC9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.14■■□□□ 1.46
ZFYVE28Q9HCC9 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
ZFYVE28Q9HCC9 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
ZFYVE28Q9HCC9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
ZFYVE28Q9HCC9 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
ZFYVE28Q9HCC9 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
ZFYVE28Q9HCC9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
ZFYVE28Q9HCC9 KRT18P68-201ENST00000392293 1000 ntBASIC24.14■■□□□ 1.45
ZFYVE28Q9HCC9 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
ZFYVE28Q9HCC9 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC24.14■■□□□ 1.45
ZFYVE28Q9HCC9 ABHD17AP6-201ENST00000458502 1044 ntBASIC24.14■■□□□ 1.45
ZFYVE28Q9HCC9 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC24.14■■□□□ 1.45
ZFYVE28Q9HCC9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
ZFYVE28Q9HCC9 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC24.13■■□□□ 1.45
ZFYVE28Q9HCC9 KRT17P2-201ENST00000300992 1314 ntBASIC24.13■■□□□ 1.45
ZFYVE28Q9HCC9 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC24.13■■□□□ 1.45
ZFYVE28Q9HCC9 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
ZFYVE28Q9HCC9 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ZFYVE28Q9HCC9 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ZFYVE28Q9HCC9 AC245052.3-201ENST00000450182 901 ntBASIC24.13■■□□□ 1.45
ZFYVE28Q9HCC9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC24.13■■□□□ 1.45
ZFYVE28Q9HCC9 SLC29A4P2-201ENST00000504749 1089 ntBASIC24.13■■□□□ 1.45
ZFYVE28Q9HCC9 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC24.13■■□□□ 1.45
ZFYVE28Q9HCC9 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC24.13■■□□□ 1.45
ZFYVE28Q9HCC9 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ZFYVE28Q9HCC9 AC137767.1-201ENST00000602918 1920 ntBASIC24.12■■□□□ 1.45
ZFYVE28Q9HCC9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC24.12■■□□□ 1.45
ZFYVE28Q9HCC9 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
ZFYVE28Q9HCC9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ZFYVE28Q9HCC9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC24.12■■□□□ 1.45
ZFYVE28Q9HCC9 AC012618.2-201ENST00000428058 849 ntBASIC24.12■■□□□ 1.45
ZFYVE28Q9HCC9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC24.12■■□□□ 1.45
ZFYVE28Q9HCC9 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC24.12■■□□□ 1.45
ZFYVE28Q9HCC9 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ZFYVE28Q9HCC9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
ZFYVE28Q9HCC9 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC24.12■■□□□ 1.45
ZFYVE28Q9HCC9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ZFYVE28Q9HCC9 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
ZFYVE28Q9HCC9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ZFYVE28Q9HCC9 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ZFYVE28Q9HCC9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ZFYVE28Q9HCC9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
ZFYVE28Q9HCC9 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
ZFYVE28Q9HCC9 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC24.11■■□□□ 1.45
ZFYVE28Q9HCC9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ZFYVE28Q9HCC9 POM121L13P-201ENST00000422362 380 ntBASIC24.11■■□□□ 1.45
ZFYVE28Q9HCC9 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ZFYVE28Q9HCC9 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC24.11■■□□□ 1.45
ZFYVE28Q9HCC9 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC24.11■■□□□ 1.45
ZFYVE28Q9HCC9 AC233702.5-201ENST00000584107 538 ntBASIC24.11■■□□□ 1.45
ZFYVE28Q9HCC9 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC24.11■■□□□ 1.45
ZFYVE28Q9HCC9 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC24.11■■□□□ 1.45
ZFYVE28Q9HCC9 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
ZFYVE28Q9HCC9 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ZFYVE28Q9HCC9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC24.11■■□□□ 1.45
ZFYVE28Q9HCC9 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
ZFYVE28Q9HCC9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.11■■□□□ 1.45
ZFYVE28Q9HCC9 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ZFYVE28Q9HCC9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
ZFYVE28Q9HCC9 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
ZFYVE28Q9HCC9 ISG20-202ENST00000379224 540 ntTSL 3 BASIC24.1■■□□□ 1.45
ZFYVE28Q9HCC9 HES2-205ENST00000487437 968 ntTSL 3 BASIC24.1■■□□□ 1.45
ZFYVE28Q9HCC9 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC24.1■■□□□ 1.45
ZFYVE28Q9HCC9 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
ZFYVE28Q9HCC9 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
ZFYVE28Q9HCC9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC24.1■■□□□ 1.45
ZFYVE28Q9HCC9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC24.1■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms