Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.33
ATP6V0A4Q9HBG4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.33■■□□□ 1.33
ATP6V0A4Q9HBG4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ATP6V0A4Q9HBG4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.33■■□□□ 1.33
ATP6V0A4Q9HBG4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ATP6V0A4Q9HBG4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ATP6V0A4Q9HBG4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
ATP6V0A4Q9HBG4 KRT16P2-201ENST00000414673 1423 ntBASIC23.33■■□□□ 1.32
ATP6V0A4Q9HBG4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
ATP6V0A4Q9HBG4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.32■■□□□ 1.32
ATP6V0A4Q9HBG4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.32■■□□□ 1.32
ATP6V0A4Q9HBG4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATP6V0A4Q9HBG4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.32■■□□□ 1.32
ATP6V0A4Q9HBG4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATP6V0A4Q9HBG4 AC007322.1-201ENST00000426983 750 ntBASIC23.32■■□□□ 1.32
ATP6V0A4Q9HBG4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.32■■□□□ 1.32
ATP6V0A4Q9HBG4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.32■■□□□ 1.32
ATP6V0A4Q9HBG4 DUX4L16-201ENST00000555130 1264 ntBASIC23.32■■□□□ 1.32
ATP6V0A4Q9HBG4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.32■■□□□ 1.32
ATP6V0A4Q9HBG4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATP6V0A4Q9HBG4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
ATP6V0A4Q9HBG4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATP6V0A4Q9HBG4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATP6V0A4Q9HBG4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.32■■□□□ 1.32
ATP6V0A4Q9HBG4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.32■■□□□ 1.32
ATP6V0A4Q9HBG4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.32■■□□□ 1.32
ATP6V0A4Q9HBG4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ATP6V0A4Q9HBG4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ATP6V0A4Q9HBG4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
ATP6V0A4Q9HBG4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.31■■□□□ 1.32
ATP6V0A4Q9HBG4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ATP6V0A4Q9HBG4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.31■■□□□ 1.32
ATP6V0A4Q9HBG4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.31■■□□□ 1.32
ATP6V0A4Q9HBG4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.31■■□□□ 1.32
ATP6V0A4Q9HBG4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
ATP6V0A4Q9HBG4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.31■■□□□ 1.32
ATP6V0A4Q9HBG4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ATP6V0A4Q9HBG4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
ATP6V0A4Q9HBG4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ATP6V0A4Q9HBG4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ATP6V0A4Q9HBG4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATP6V0A4Q9HBG4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATP6V0A4Q9HBG4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
ATP6V0A4Q9HBG4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATP6V0A4Q9HBG4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ATP6V0A4Q9HBG4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATP6V0A4Q9HBG4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.3■■□□□ 1.32
ATP6V0A4Q9HBG4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.3■■□□□ 1.32
ATP6V0A4Q9HBG4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.3■■□□□ 1.32
ATP6V0A4Q9HBG4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.3■■□□□ 1.32
ATP6V0A4Q9HBG4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.3■■□□□ 1.32
ATP6V0A4Q9HBG4 AL121832.2-201ENST00000610979 668 ntBASIC23.3■■□□□ 1.32
ATP6V0A4Q9HBG4 AC010536.3-201ENST00000620306 533 ntBASIC23.3■■□□□ 1.32
ATP6V0A4Q9HBG4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
ATP6V0A4Q9HBG4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.3■■□□□ 1.32
ATP6V0A4Q9HBG4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATP6V0A4Q9HBG4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.3■■□□□ 1.32
ATP6V0A4Q9HBG4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATP6V0A4Q9HBG4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.29■■□□□ 1.32
ATP6V0A4Q9HBG4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.29■■□□□ 1.32
ATP6V0A4Q9HBG4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ATP6V0A4Q9HBG4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ATP6V0A4Q9HBG4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.29■■□□□ 1.32
ATP6V0A4Q9HBG4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ATP6V0A4Q9HBG4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ATP6V0A4Q9HBG4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.29■■□□□ 1.32
ATP6V0A4Q9HBG4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.29■■□□□ 1.32
ATP6V0A4Q9HBG4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
ATP6V0A4Q9HBG4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC23.29■■□□□ 1.32
ATP6V0A4Q9HBG4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ATP6V0A4Q9HBG4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ATP6V0A4Q9HBG4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
ATP6V0A4Q9HBG4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
ATP6V0A4Q9HBG4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
ATP6V0A4Q9HBG4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
ATP6V0A4Q9HBG4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.28■■□□□ 1.32
ATP6V0A4Q9HBG4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ATP6V0A4Q9HBG4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ATP6V0A4Q9HBG4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ATP6V0A4Q9HBG4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.28■■□□□ 1.32
ATP6V0A4Q9HBG4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
ATP6V0A4Q9HBG4 AC083906.2-201ENST00000511578 360 ntBASIC23.28■■□□□ 1.32
ATP6V0A4Q9HBG4 AC005181.1-201ENST00000604782 1256 ntBASIC23.28■■□□□ 1.32
ATP6V0A4Q9HBG4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.28■■□□□ 1.32
ATP6V0A4Q9HBG4 AL050303.2-201ENST00000619798 666 ntBASIC23.28■■□□□ 1.32
ATP6V0A4Q9HBG4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
ATP6V0A4Q9HBG4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ATP6V0A4Q9HBG4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
ATP6V0A4Q9HBG4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ATP6V0A4Q9HBG4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ATP6V0A4Q9HBG4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
ATP6V0A4Q9HBG4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.27■■□□□ 1.32
ATP6V0A4Q9HBG4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
ATP6V0A4Q9HBG4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
ATP6V0A4Q9HBG4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
ATP6V0A4Q9HBG4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.27■■□□□ 1.32
ATP6V0A4Q9HBG4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.27■■□□□ 1.32
ATP6V0A4Q9HBG4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.27■■□□□ 1.32
ATP6V0A4Q9HBG4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ATP6V0A4Q9HBG4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms