Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 DUX4L2-201ENST00000561772 1275 ntBASIC18.74■□□□□ 0.59
SEC61A2Q9H9S3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.74■□□□□ 0.59
SEC61A2Q9H9S3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
SEC61A2Q9H9S3 DUX4L6-201ENST00000626483 1275 ntBASIC18.74■□□□□ 0.59
SEC61A2Q9H9S3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SEC61A2Q9H9S3 DUX4L1-201ENST00000627662 1275 ntBASIC18.74■□□□□ 0.59
SEC61A2Q9H9S3 DUX4L8-201ENST00000629013 1275 ntBASIC18.74■□□□□ 0.59
SEC61A2Q9H9S3 DUX4L3-201ENST00000630187 1275 ntBASIC18.74■□□□□ 0.59
SEC61A2Q9H9S3 DUX4L7-201ENST00000630678 1275 ntBASIC18.74■□□□□ 0.59
SEC61A2Q9H9S3 DUX4L5-201ENST00000630834 1275 ntBASIC18.74■□□□□ 0.59
SEC61A2Q9H9S3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SEC61A2Q9H9S3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.74■□□□□ 0.59
SEC61A2Q9H9S3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SEC61A2Q9H9S3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SEC61A2Q9H9S3 AC005224.4-201ENST00000583262 1652 ntBASIC18.73■□□□□ 0.59
SEC61A2Q9H9S3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SEC61A2Q9H9S3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.73■□□□□ 0.59
SEC61A2Q9H9S3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.73■□□□□ 0.59
SEC61A2Q9H9S3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SEC61A2Q9H9S3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.73■□□□□ 0.59
SEC61A2Q9H9S3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.73■□□□□ 0.59
SEC61A2Q9H9S3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SEC61A2Q9H9S3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SEC61A2Q9H9S3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SEC61A2Q9H9S3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SEC61A2Q9H9S3 AC123595.1-201ENST00000440769 1046 ntBASIC18.73■□□□□ 0.59
SEC61A2Q9H9S3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
SEC61A2Q9H9S3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.73■□□□□ 0.59
SEC61A2Q9H9S3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SEC61A2Q9H9S3 MIR5787-201ENST00000611784 55 ntBASIC18.73■□□□□ 0.59
SEC61A2Q9H9S3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SEC61A2Q9H9S3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.73■□□□□ 0.59
SEC61A2Q9H9S3 AIRN-201ENST00000601203 4374 ntBASIC18.73■□□□□ 0.59
SEC61A2Q9H9S3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.73■□□□□ 0.59
SEC61A2Q9H9S3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SEC61A2Q9H9S3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SEC61A2Q9H9S3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SEC61A2Q9H9S3 AC005229.4-201ENST00000610085 2198 ntBASIC18.72■□□□□ 0.59
SEC61A2Q9H9S3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SEC61A2Q9H9S3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.72■□□□□ 0.59
SEC61A2Q9H9S3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SEC61A2Q9H9S3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.72■□□□□ 0.59
SEC61A2Q9H9S3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.72■□□□□ 0.59
SEC61A2Q9H9S3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
SEC61A2Q9H9S3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SEC61A2Q9H9S3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SEC61A2Q9H9S3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.72■□□□□ 0.59
SEC61A2Q9H9S3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SEC61A2Q9H9S3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SEC61A2Q9H9S3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.72■□□□□ 0.59
SEC61A2Q9H9S3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SEC61A2Q9H9S3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.72■□□□□ 0.59
SEC61A2Q9H9S3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
SEC61A2Q9H9S3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.72■□□□□ 0.59
SEC61A2Q9H9S3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SEC61A2Q9H9S3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.71■□□□□ 0.59
SEC61A2Q9H9S3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.71■□□□□ 0.59
SEC61A2Q9H9S3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SEC61A2Q9H9S3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.71■□□□□ 0.59
SEC61A2Q9H9S3 LINC02228-203ENST00000641970 1355 ntBASIC18.71■□□□□ 0.59
SEC61A2Q9H9S3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SEC61A2Q9H9S3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SEC61A2Q9H9S3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SEC61A2Q9H9S3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.71■□□□□ 0.59
SEC61A2Q9H9S3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SEC61A2Q9H9S3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
SEC61A2Q9H9S3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SEC61A2Q9H9S3 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.71■□□□□ 0.59
SEC61A2Q9H9S3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.71■□□□□ 0.59
SEC61A2Q9H9S3 TERF1P2-201ENST00000583350 1212 ntBASIC18.71■□□□□ 0.59
SEC61A2Q9H9S3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SEC61A2Q9H9S3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SEC61A2Q9H9S3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SEC61A2Q9H9S3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SEC61A2Q9H9S3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SEC61A2Q9H9S3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SEC61A2Q9H9S3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SEC61A2Q9H9S3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.71■□□□□ 0.58
SEC61A2Q9H9S3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
SEC61A2Q9H9S3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
SEC61A2Q9H9S3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEC61A2Q9H9S3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SEC61A2Q9H9S3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SEC61A2Q9H9S3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEC61A2Q9H9S3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.7■□□□□ 0.58
SEC61A2Q9H9S3 AF106564.1-201ENST00000607058 2553 ntBASIC18.7■□□□□ 0.58
SEC61A2Q9H9S3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEC61A2Q9H9S3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEC61A2Q9H9S3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEC61A2Q9H9S3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEC61A2Q9H9S3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SEC61A2Q9H9S3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SEC61A2Q9H9S3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SEC61A2Q9H9S3 AL162430.1-201ENST00000480705 870 ntBASIC18.7■□□□□ 0.58
SEC61A2Q9H9S3 KRT18P14-201ENST00000534205 1250 ntBASIC18.7■□□□□ 0.58
SEC61A2Q9H9S3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEC61A2Q9H9S3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SEC61A2Q9H9S3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.69■□□□□ 0.58
SEC61A2Q9H9S3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SEC61A2Q9H9S3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms