Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC31.02■■■□□ 2.56
SCAF1Q9H7N4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC31.02■■■□□ 2.56
SCAF1Q9H7N4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
SCAF1Q9H7N4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
SCAF1Q9H7N4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
SCAF1Q9H7N4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC31.01■■■□□ 2.56
SCAF1Q9H7N4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC31.01■■■□□ 2.56
SCAF1Q9H7N4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC31.01■■■□□ 2.56
SCAF1Q9H7N4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.56
SCAF1Q9H7N4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC31.01■■■□□ 2.56
SCAF1Q9H7N4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC31.01■■■□□ 2.56
SCAF1Q9H7N4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
SCAF1Q9H7N4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
SCAF1Q9H7N4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC31.01■■■□□ 2.55
SCAF1Q9H7N4 BID-212ENST00000614949 1988 ntTSL 5 BASIC31.01■■■□□ 2.55
SCAF1Q9H7N4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
SCAF1Q9H7N4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
SCAF1Q9H7N4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
SCAF1Q9H7N4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC31.01■■■□□ 2.55
SCAF1Q9H7N4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
SCAF1Q9H7N4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
SCAF1Q9H7N4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC31■■■□□ 2.55
SCAF1Q9H7N4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC31■■■□□ 2.55
SCAF1Q9H7N4 AC092118.2-201ENST00000613495 667 ntBASIC31■■■□□ 2.55
SCAF1Q9H7N4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
SCAF1Q9H7N4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC31■■■□□ 2.55
SCAF1Q9H7N4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SCAF1Q9H7N4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC31■■■□□ 2.55
SCAF1Q9H7N4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC31■■■□□ 2.55
SCAF1Q9H7N4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC31■■■□□ 2.55
SCAF1Q9H7N4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SCAF1Q9H7N4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
SCAF1Q9H7N4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
SCAF1Q9H7N4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
SCAF1Q9H7N4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC31■■■□□ 2.55
SCAF1Q9H7N4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SCAF1Q9H7N4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC31■■■□□ 2.55
SCAF1Q9H7N4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
SCAF1Q9H7N4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC30.99■■■□□ 2.55
SCAF1Q9H7N4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC30.99■■■□□ 2.55
SCAF1Q9H7N4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SCAF1Q9H7N4 AL157384.1-201ENST00000445995 2473 ntBASIC30.99■■■□□ 2.55
SCAF1Q9H7N4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC30.99■■■□□ 2.55
SCAF1Q9H7N4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SCAF1Q9H7N4 UNC93B4-201ENST00000505679 747 ntBASIC30.98■■■□□ 2.55
SCAF1Q9H7N4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC30.98■■■□□ 2.55
SCAF1Q9H7N4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC30.98■■■□□ 2.55
SCAF1Q9H7N4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
SCAF1Q9H7N4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC30.98■■■□□ 2.55
SCAF1Q9H7N4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SCAF1Q9H7N4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SCAF1Q9H7N4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
SCAF1Q9H7N4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SCAF1Q9H7N4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC30.98■■■□□ 2.55
SCAF1Q9H7N4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SCAF1Q9H7N4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC30.98■■■□□ 2.55
SCAF1Q9H7N4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC30.98■■■□□ 2.55
SCAF1Q9H7N4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
SCAF1Q9H7N4 AC079140.4-201ENST00000507448 529 ntBASIC30.98■■■□□ 2.55
SCAF1Q9H7N4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
SCAF1Q9H7N4 MIR4758-201ENST00000577688 71 ntBASIC30.98■■■□□ 2.55
SCAF1Q9H7N4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC30.98■■■□□ 2.55
SCAF1Q9H7N4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC30.98■■■□□ 2.55
SCAF1Q9H7N4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC30.97■■■□□ 2.55
SCAF1Q9H7N4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
SCAF1Q9H7N4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SCAF1Q9H7N4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC30.97■■■□□ 2.55
SCAF1Q9H7N4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
SCAF1Q9H7N4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC30.97■■■□□ 2.55
SCAF1Q9H7N4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC30.97■■■□□ 2.55
SCAF1Q9H7N4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC30.97■■■□□ 2.55
SCAF1Q9H7N4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
SCAF1Q9H7N4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC30.96■■■□□ 2.55
SCAF1Q9H7N4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
SCAF1Q9H7N4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
SCAF1Q9H7N4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC30.96■■■□□ 2.55
SCAF1Q9H7N4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC30.96■■■□□ 2.55
SCAF1Q9H7N4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC30.96■■■□□ 2.55
SCAF1Q9H7N4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC30.96■■■□□ 2.55
SCAF1Q9H7N4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC30.96■■■□□ 2.55
SCAF1Q9H7N4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
SCAF1Q9H7N4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
SCAF1Q9H7N4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC30.95■■■□□ 2.55
SCAF1Q9H7N4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.54
SCAF1Q9H7N4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.54
SCAF1Q9H7N4 ESRRAP1-201ENST00000400596 1257 ntBASIC30.95■■■□□ 2.54
SCAF1Q9H7N4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC30.94■■■□□ 2.54
SCAF1Q9H7N4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC30.94■■■□□ 2.54
SCAF1Q9H7N4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
SCAF1Q9H7N4 AC005229.4-201ENST00000610085 2198 ntBASIC30.94■■■□□ 2.54
SCAF1Q9H7N4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SCAF1Q9H7N4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
SCAF1Q9H7N4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
SCAF1Q9H7N4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SCAF1Q9H7N4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
SCAF1Q9H7N4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SCAF1Q9H7N4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
SCAF1Q9H7N4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
SCAF1Q9H7N4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC30.94■■■□□ 2.54
SCAF1Q9H7N4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC30.94■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms