Protein–RNA interactions for Protein: Q9H3S7

PTPN23, Tyrosine-protein phosphatase non-receptor type 23, humanhuman

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23Q9H3S7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PTPN23Q9H3S7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
PTPN23Q9H3S7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PTPN23Q9H3S7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
PTPN23Q9H3S7 DUSP5P2-201ENST00000426873 1033 ntBASIC31.85■■■□□ 2.69
PTPN23Q9H3S7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PTPN23Q9H3S7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
PTPN23Q9H3S7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
PTPN23Q9H3S7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC31.84■■■□□ 2.69
PTPN23Q9H3S7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
PTPN23Q9H3S7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
PTPN23Q9H3S7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
PTPN23Q9H3S7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
PTPN23Q9H3S7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
PTPN23Q9H3S7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
PTPN23Q9H3S7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC31.84■■■□□ 2.69
PTPN23Q9H3S7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC31.84■■■□□ 2.69
PTPN23Q9H3S7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC31.84■■■□□ 2.69
PTPN23Q9H3S7 FAM21FP-204ENST00000608637 956 ntBASIC31.84■■■□□ 2.69
PTPN23Q9H3S7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
PTPN23Q9H3S7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
PTPN23Q9H3S7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
PTPN23Q9H3S7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
PTPN23Q9H3S7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
PTPN23Q9H3S7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC31.84■■■□□ 2.69
PTPN23Q9H3S7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
PTPN23Q9H3S7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC31.84■■■□□ 2.69
PTPN23Q9H3S7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
PTPN23Q9H3S7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC31.83■■■□□ 2.69
PTPN23Q9H3S7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
PTPN23Q9H3S7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
PTPN23Q9H3S7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC31.83■■■□□ 2.69
PTPN23Q9H3S7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
PTPN23Q9H3S7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
PTPN23Q9H3S7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PTPN23Q9H3S7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC31.82■■■□□ 2.69
PTPN23Q9H3S7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
PTPN23Q9H3S7 TSPY20P-201ENST00000450910 630 ntBASIC31.82■■■□□ 2.69
PTPN23Q9H3S7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC31.82■■■□□ 2.69
PTPN23Q9H3S7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.69
PTPN23Q9H3S7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC31.82■■■□□ 2.68
PTPN23Q9H3S7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC31.82■■■□□ 2.68
PTPN23Q9H3S7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC31.82■■■□□ 2.68
PTPN23Q9H3S7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
PTPN23Q9H3S7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC31.82■■■□□ 2.68
PTPN23Q9H3S7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
PTPN23Q9H3S7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC31.81■■■□□ 2.68
PTPN23Q9H3S7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
PTPN23Q9H3S7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC31.81■■■□□ 2.68
PTPN23Q9H3S7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
PTPN23Q9H3S7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
PTPN23Q9H3S7 AC091874.3-201ENST00000512672 1195 ntBASIC31.81■■■□□ 2.68
PTPN23Q9H3S7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
PTPN23Q9H3S7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
PTPN23Q9H3S7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC31.8■■■□□ 2.68
PTPN23Q9H3S7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
PTPN23Q9H3S7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC31.8■■■□□ 2.68
PTPN23Q9H3S7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC31.8■■■□□ 2.68
PTPN23Q9H3S7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PTPN23Q9H3S7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC31.8■■■□□ 2.68
PTPN23Q9H3S7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
PTPN23Q9H3S7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PTPN23Q9H3S7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PTPN23Q9H3S7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC31.79■■■□□ 2.68
PTPN23Q9H3S7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC31.79■■■□□ 2.68
PTPN23Q9H3S7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC31.79■■■□□ 2.68
PTPN23Q9H3S7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC31.79■■■□□ 2.68
PTPN23Q9H3S7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC31.79■■■□□ 2.68
PTPN23Q9H3S7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PTPN23Q9H3S7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
PTPN23Q9H3S7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC31.78■■■□□ 2.68
PTPN23Q9H3S7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC31.78■■■□□ 2.68
PTPN23Q9H3S7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC31.78■■■□□ 2.68
PTPN23Q9H3S7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC31.78■■■□□ 2.68
PTPN23Q9H3S7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
PTPN23Q9H3S7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC31.78■■■□□ 2.68
PTPN23Q9H3S7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
PTPN23Q9H3S7 KRT17P1-201ENST00000399211 1546 ntBASIC31.78■■■□□ 2.68
PTPN23Q9H3S7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC31.78■■■□□ 2.68
PTPN23Q9H3S7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC31.78■■■□□ 2.68
PTPN23Q9H3S7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
PTPN23Q9H3S7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC31.78■■■□□ 2.68
PTPN23Q9H3S7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC31.78■■■□□ 2.68
PTPN23Q9H3S7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC31.78■■■□□ 2.68
PTPN23Q9H3S7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
PTPN23Q9H3S7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PTPN23Q9H3S7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
PTPN23Q9H3S7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PTPN23Q9H3S7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PTPN23Q9H3S7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PTPN23Q9H3S7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC31.77■■■□□ 2.68
PTPN23Q9H3S7 RNA5SP413-201ENST00000516373 109 ntBASIC31.77■■■□□ 2.68
PTPN23Q9H3S7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PTPN23Q9H3S7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PTPN23Q9H3S7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC31.77■■■□□ 2.68
PTPN23Q9H3S7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
PTPN23Q9H3S7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC31.76■■■□□ 2.68
PTPN23Q9H3S7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
PTPN23Q9H3S7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC31.76■■■□□ 2.67
PTPN23Q9H3S7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC31.76■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms