Protein–RNA interactions for Protein: Q9C0K0

BCL11B, B-cell lymphoma/leukemia 11B, humanhuman

Predicted RBP Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL11BQ9C0K0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
BCL11BQ9C0K0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
BCL11BQ9C0K0 LINC01124-201ENST00000409786 2117 ntBASIC27.38■■□□□ 1.97
BCL11BQ9C0K0 KRT17P2-201ENST00000300992 1314 ntBASIC27.38■■□□□ 1.97
BCL11BQ9C0K0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC27.38■■□□□ 1.97
BCL11BQ9C0K0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
BCL11BQ9C0K0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
BCL11BQ9C0K0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
BCL11BQ9C0K0 RPS2P55-201ENST00000397318 883 ntBASIC27.37■■□□□ 1.97
BCL11BQ9C0K0 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC27.37■■□□□ 1.97
BCL11BQ9C0K0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
BCL11BQ9C0K0 AC107956.1-201ENST00000494359 873 ntBASIC27.37■■□□□ 1.97
BCL11BQ9C0K0 SLC29A4P2-201ENST00000504749 1089 ntBASIC27.37■■□□□ 1.97
BCL11BQ9C0K0 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC27.37■■□□□ 1.97
BCL11BQ9C0K0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC27.37■■□□□ 1.97
BCL11BQ9C0K0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC27.37■■□□□ 1.97
BCL11BQ9C0K0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
BCL11BQ9C0K0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC27.37■■□□□ 1.97
BCL11BQ9C0K0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
BCL11BQ9C0K0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
BCL11BQ9C0K0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
BCL11BQ9C0K0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
BCL11BQ9C0K0 AC061975.6-201ENST00000579045 1553 ntBASIC27.36■■□□□ 1.97
BCL11BQ9C0K0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
BCL11BQ9C0K0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
BCL11BQ9C0K0 TSPY7P-201ENST00000431358 1114 ntBASIC27.36■■□□□ 1.97
BCL11BQ9C0K0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC27.36■■□□□ 1.97
BCL11BQ9C0K0 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
BCL11BQ9C0K0 TK2-213ENST00000563369 882 ntTSL 5 BASIC27.36■■□□□ 1.97
BCL11BQ9C0K0 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC27.36■■□□□ 1.97
BCL11BQ9C0K0 AL589743.5-201ENST00000616611 1050 ntBASIC27.36■■□□□ 1.97
BCL11BQ9C0K0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC27.36■■□□□ 1.97
BCL11BQ9C0K0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC27.35■■□□□ 1.97
BCL11BQ9C0K0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
BCL11BQ9C0K0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
BCL11BQ9C0K0 ABCB10P4-201ENST00000566803 2184 ntBASIC27.35■■□□□ 1.97
BCL11BQ9C0K0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
BCL11BQ9C0K0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
BCL11BQ9C0K0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC27.35■■□□□ 1.97
BCL11BQ9C0K0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
BCL11BQ9C0K0 SOX15-203ENST00000570788 1093 ntBASIC27.35■■□□□ 1.97
BCL11BQ9C0K0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC27.35■■□□□ 1.97
BCL11BQ9C0K0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
BCL11BQ9C0K0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC27.34■■□□□ 1.97
BCL11BQ9C0K0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
BCL11BQ9C0K0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC27.34■■□□□ 1.97
BCL11BQ9C0K0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC27.34■■□□□ 1.97
BCL11BQ9C0K0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC27.34■■□□□ 1.97
BCL11BQ9C0K0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC27.34■■□□□ 1.97
BCL11BQ9C0K0 OR2A1-AS1-207ENST00000486094 819 ntBASIC27.34■■□□□ 1.97
BCL11BQ9C0K0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC27.34■■□□□ 1.97
BCL11BQ9C0K0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
BCL11BQ9C0K0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC27.34■■□□□ 1.97
BCL11BQ9C0K0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC27.34■■□□□ 1.97
BCL11BQ9C0K0 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
BCL11BQ9C0K0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC27.33■■□□□ 1.97
BCL11BQ9C0K0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
BCL11BQ9C0K0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
BCL11BQ9C0K0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
BCL11BQ9C0K0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC27.33■■□□□ 1.97
BCL11BQ9C0K0 AC133561.5-201ENST00000635547 218 ntBASIC27.33■■□□□ 1.97
BCL11BQ9C0K0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
BCL11BQ9C0K0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
BCL11BQ9C0K0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
BCL11BQ9C0K0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC27.32■■□□□ 1.96
BCL11BQ9C0K0 ISG20-202ENST00000379224 540 ntTSL 3 BASIC27.32■■□□□ 1.96
BCL11BQ9C0K0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
BCL11BQ9C0K0 AC091799.1-201ENST00000422823 811 ntBASIC27.32■■□□□ 1.96
BCL11BQ9C0K0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC27.32■■□□□ 1.96
BCL11BQ9C0K0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
BCL11BQ9C0K0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
BCL11BQ9C0K0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
BCL11BQ9C0K0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
BCL11BQ9C0K0 RCN1P1-201ENST00000400413 996 ntBASIC27.31■■□□□ 1.96
BCL11BQ9C0K0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
BCL11BQ9C0K0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
BCL11BQ9C0K0 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC27.31■■□□□ 1.96
BCL11BQ9C0K0 AC012306.2-201ENST00000609350 630 ntBASIC27.31■■□□□ 1.96
BCL11BQ9C0K0 AC097493.4-201ENST00000641197 219 ntBASIC27.31■■□□□ 1.96
BCL11BQ9C0K0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
BCL11BQ9C0K0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
BCL11BQ9C0K0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
BCL11BQ9C0K0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC27.31■■□□□ 1.96
BCL11BQ9C0K0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
BCL11BQ9C0K0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
BCL11BQ9C0K0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
BCL11BQ9C0K0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
BCL11BQ9C0K0 AC087499.1-201ENST00000418141 1075 ntBASIC27.3■■□□□ 1.96
BCL11BQ9C0K0 POM121L13P-201ENST00000422362 380 ntBASIC27.3■■□□□ 1.96
BCL11BQ9C0K0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC27.3■■□□□ 1.96
BCL11BQ9C0K0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC27.3■■□□□ 1.96
BCL11BQ9C0K0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC27.3■■□□□ 1.96
BCL11BQ9C0K0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
BCL11BQ9C0K0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
BCL11BQ9C0K0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
BCL11BQ9C0K0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC27.3■■□□□ 1.96
BCL11BQ9C0K0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC27.29■■□□□ 1.96
BCL11BQ9C0K0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
BCL11BQ9C0K0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC27.29■■□□□ 1.96
BCL11BQ9C0K0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms