Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 AC241377.3-202ENST00000626088 1088 ntBASIC18.81■□□□□ 0.6
CDCA4Q9BXL8 AC241585.3-202ENST00000628937 1088 ntBASIC18.81■□□□□ 0.6
CDCA4Q9BXL8 AC245100.8-202ENST00000629247 1058 ntBASIC18.81■□□□□ 0.6
CDCA4Q9BXL8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDCA4Q9BXL8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.81■□□□□ 0.6
CDCA4Q9BXL8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CDCA4Q9BXL8 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.81■□□□□ 0.6
CDCA4Q9BXL8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDCA4Q9BXL8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDCA4Q9BXL8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDCA4Q9BXL8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CDCA4Q9BXL8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDCA4Q9BXL8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.8■□□□□ 0.6
CDCA4Q9BXL8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.8■□□□□ 0.6
CDCA4Q9BXL8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDCA4Q9BXL8 AC007225.1-201ENST00000566331 1836 ntBASIC18.8■□□□□ 0.6
CDCA4Q9BXL8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.8■□□□□ 0.6
CDCA4Q9BXL8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.8■□□□□ 0.6
CDCA4Q9BXL8 AC087239.1-201ENST00000622671 572 ntBASIC18.8■□□□□ 0.6
CDCA4Q9BXL8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.8■□□□□ 0.6
CDCA4Q9BXL8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDCA4Q9BXL8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
CDCA4Q9BXL8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.8■□□□□ 0.6
CDCA4Q9BXL8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDCA4Q9BXL8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDCA4Q9BXL8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
CDCA4Q9BXL8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.79■□□□□ 0.6
CDCA4Q9BXL8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDCA4Q9BXL8 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDCA4Q9BXL8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDCA4Q9BXL8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.79■□□□□ 0.6
CDCA4Q9BXL8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDCA4Q9BXL8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDCA4Q9BXL8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.79■□□□□ 0.6
CDCA4Q9BXL8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.79■□□□□ 0.6
CDCA4Q9BXL8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDCA4Q9BXL8 AC121338.2-201ENST00000622535 1744 ntBASIC18.79■□□□□ 0.6
CDCA4Q9BXL8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.79■□□□□ 0.6
CDCA4Q9BXL8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.79■□□□□ 0.6
CDCA4Q9BXL8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDCA4Q9BXL8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDCA4Q9BXL8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDCA4Q9BXL8 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDCA4Q9BXL8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CDCA4Q9BXL8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDCA4Q9BXL8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDCA4Q9BXL8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.78■□□□□ 0.6
CDCA4Q9BXL8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDCA4Q9BXL8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CDCA4Q9BXL8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.78■□□□□ 0.6
CDCA4Q9BXL8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.78■□□□□ 0.6
CDCA4Q9BXL8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDCA4Q9BXL8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CDCA4Q9BXL8 AC092028.1-203ENST00000608262 953 ntBASIC18.78■□□□□ 0.6
CDCA4Q9BXL8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDCA4Q9BXL8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDCA4Q9BXL8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDCA4Q9BXL8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDCA4Q9BXL8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CDCA4Q9BXL8 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDCA4Q9BXL8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.78■□□□□ 0.6
CDCA4Q9BXL8 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDCA4Q9BXL8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDCA4Q9BXL8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.77■□□□□ 0.6
CDCA4Q9BXL8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDCA4Q9BXL8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.77■□□□□ 0.6
CDCA4Q9BXL8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDCA4Q9BXL8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDCA4Q9BXL8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDCA4Q9BXL8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CDCA4Q9BXL8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDCA4Q9BXL8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CDCA4Q9BXL8 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.77■□□□□ 0.6
CDCA4Q9BXL8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.77■□□□□ 0.6
CDCA4Q9BXL8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDCA4Q9BXL8 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDCA4Q9BXL8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CDCA4Q9BXL8 AC010141.3-201ENST00000456659 717 ntBASIC18.77■□□□□ 0.6
CDCA4Q9BXL8 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CDCA4Q9BXL8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDCA4Q9BXL8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDCA4Q9BXL8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDCA4Q9BXL8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CDCA4Q9BXL8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDCA4Q9BXL8 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.59
CDCA4Q9BXL8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDCA4Q9BXL8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDCA4Q9BXL8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.76■□□□□ 0.59
CDCA4Q9BXL8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDCA4Q9BXL8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
CDCA4Q9BXL8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDCA4Q9BXL8 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDCA4Q9BXL8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDCA4Q9BXL8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.76■□□□□ 0.59
CDCA4Q9BXL8 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.76■□□□□ 0.59
CDCA4Q9BXL8 MIR4787-201ENST00000607364 84 ntBASIC18.76■□□□□ 0.59
CDCA4Q9BXL8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDCA4Q9BXL8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CDCA4Q9BXL8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.76■□□□□ 0.59
CDCA4Q9BXL8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms