Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC25.54■■□□□ 1.68
RPAP1Q9BWH6 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RPAP1Q9BWH6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC25.54■■□□□ 1.68
RPAP1Q9BWH6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
RPAP1Q9BWH6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
RPAP1Q9BWH6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
RPAP1Q9BWH6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC25.53■■□□□ 1.68
RPAP1Q9BWH6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC25.53■■□□□ 1.68
RPAP1Q9BWH6 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
RPAP1Q9BWH6 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
RPAP1Q9BWH6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RPAP1Q9BWH6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC25.53■■□□□ 1.68
RPAP1Q9BWH6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RPAP1Q9BWH6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RPAP1Q9BWH6 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RPAP1Q9BWH6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RPAP1Q9BWH6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RPAP1Q9BWH6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RPAP1Q9BWH6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC25.53■■□□□ 1.68
RPAP1Q9BWH6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC25.53■■□□□ 1.68
RPAP1Q9BWH6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RPAP1Q9BWH6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RPAP1Q9BWH6 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RPAP1Q9BWH6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RPAP1Q9BWH6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC25.52■■□□□ 1.68
RPAP1Q9BWH6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC25.52■■□□□ 1.68
RPAP1Q9BWH6 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC25.52■■□□□ 1.68
RPAP1Q9BWH6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC25.52■■□□□ 1.68
RPAP1Q9BWH6 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
RPAP1Q9BWH6 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC25.52■■□□□ 1.68
RPAP1Q9BWH6 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
RPAP1Q9BWH6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
RPAP1Q9BWH6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RPAP1Q9BWH6 AC026310.3-201ENST00000625186 2373 ntBASIC25.51■■□□□ 1.67
RPAP1Q9BWH6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC25.51■■□□□ 1.67
RPAP1Q9BWH6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RPAP1Q9BWH6 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
RPAP1Q9BWH6 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RPAP1Q9BWH6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC25.51■■□□□ 1.67
RPAP1Q9BWH6 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC25.51■■□□□ 1.67
RPAP1Q9BWH6 APTR-203ENST00000430801 583 ntTSL 5 BASIC25.51■■□□□ 1.67
RPAP1Q9BWH6 UQCRFS1P1-201ENST00000435169 820 ntBASIC25.51■■□□□ 1.67
RPAP1Q9BWH6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
RPAP1Q9BWH6 AC010536.3-201ENST00000620306 533 ntBASIC25.51■■□□□ 1.67
RPAP1Q9BWH6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RPAP1Q9BWH6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RPAP1Q9BWH6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RPAP1Q9BWH6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC25.5■■□□□ 1.67
RPAP1Q9BWH6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
RPAP1Q9BWH6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC25.5■■□□□ 1.67
RPAP1Q9BWH6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC25.5■■□□□ 1.67
RPAP1Q9BWH6 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
RPAP1Q9BWH6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
RPAP1Q9BWH6 KRT18P6-201ENST00000555540 1265 ntBASIC25.5■■□□□ 1.67
RPAP1Q9BWH6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC25.5■■□□□ 1.67
RPAP1Q9BWH6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
RPAP1Q9BWH6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RPAP1Q9BWH6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC25.5■■□□□ 1.67
RPAP1Q9BWH6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC25.5■■□□□ 1.67
RPAP1Q9BWH6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
RPAP1Q9BWH6 AC244015.2-201ENST00000616358 1861 ntBASIC25.49■■□□□ 1.67
RPAP1Q9BWH6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
RPAP1Q9BWH6 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC25.49■■□□□ 1.67
RPAP1Q9BWH6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
RPAP1Q9BWH6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
RPAP1Q9BWH6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
RPAP1Q9BWH6 SLC29A4P1-201ENST00000398760 971 ntBASIC25.49■■□□□ 1.67
RPAP1Q9BWH6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
RPAP1Q9BWH6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC25.49■■□□□ 1.67
RPAP1Q9BWH6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC25.49■■□□□ 1.67
RPAP1Q9BWH6 AL138781.1-201ENST00000566567 1274 ntBASIC25.49■■□□□ 1.67
RPAP1Q9BWH6 AC133552.2-202ENST00000575694 574 ntBASIC25.49■■□□□ 1.67
RPAP1Q9BWH6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RPAP1Q9BWH6 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
RPAP1Q9BWH6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC25.49■■□□□ 1.67
RPAP1Q9BWH6 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RPAP1Q9BWH6 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RPAP1Q9BWH6 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
RPAP1Q9BWH6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RPAP1Q9BWH6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC25.48■■□□□ 1.67
RPAP1Q9BWH6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC25.48■■□□□ 1.67
RPAP1Q9BWH6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RPAP1Q9BWH6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RPAP1Q9BWH6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
RPAP1Q9BWH6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC25.48■■□□□ 1.67
RPAP1Q9BWH6 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RPAP1Q9BWH6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC25.48■■□□□ 1.67
RPAP1Q9BWH6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RPAP1Q9BWH6 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RPAP1Q9BWH6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC25.47■■□□□ 1.67
RPAP1Q9BWH6 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RPAP1Q9BWH6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RPAP1Q9BWH6 AC073210.2-201ENST00000430369 194 ntBASIC25.47■■□□□ 1.67
RPAP1Q9BWH6 AC069152.1-201ENST00000438030 544 ntBASIC25.47■■□□□ 1.67
RPAP1Q9BWH6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC25.47■■□□□ 1.67
RPAP1Q9BWH6 EEF1DP3-203ENST00000566025 782 ntBASIC25.47■■□□□ 1.67
RPAP1Q9BWH6 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RPAP1Q9BWH6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RPAP1Q9BWH6 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
RPAP1Q9BWH6 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms