Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 NCF1B-203ENST00000435988 1254 ntBASIC16.3■□□□□ 0.2
RAX2Q96IS3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAX2Q96IS3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.3■□□□□ 0.2
RAX2Q96IS3 SLC7A5P2-201ENST00000553010 536 ntBASIC16.3■□□□□ 0.2
RAX2Q96IS3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.3■□□□□ 0.2
RAX2Q96IS3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.3■□□□□ 0.2
RAX2Q96IS3 AC104771.1-201ENST00000603335 964 ntBASIC16.3■□□□□ 0.2
RAX2Q96IS3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.3■□□□□ 0.2
RAX2Q96IS3 AC010536.3-201ENST00000620306 533 ntBASIC16.3■□□□□ 0.2
RAX2Q96IS3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RAX2Q96IS3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAX2Q96IS3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
RAX2Q96IS3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RAX2Q96IS3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAX2Q96IS3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.29■□□□□ 0.2
RAX2Q96IS3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.29■□□□□ 0.2
RAX2Q96IS3 AC092053.2-201ENST00000640557 1818 ntBASIC16.29■□□□□ 0.2
RAX2Q96IS3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAX2Q96IS3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAX2Q96IS3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.29■□□□□ 0.2
RAX2Q96IS3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.29■□□□□ 0.2
RAX2Q96IS3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.29■□□□□ 0.2
RAX2Q96IS3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAX2Q96IS3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.29■□□□□ 0.2
RAX2Q96IS3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.29■□□□□ 0.2
RAX2Q96IS3 AL109923.1-201ENST00000618799 583 ntBASIC16.29■□□□□ 0.2
RAX2Q96IS3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAX2Q96IS3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAX2Q96IS3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAX2Q96IS3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.29■□□□□ 0.2
RAX2Q96IS3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAX2Q96IS3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.29■□□□□ 0.2
RAX2Q96IS3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
RAX2Q96IS3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAX2Q96IS3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
RAX2Q96IS3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAX2Q96IS3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RAX2Q96IS3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAX2Q96IS3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.29■□□□□ 0.2
RAX2Q96IS3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.29■□□□□ 0.2
RAX2Q96IS3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAX2Q96IS3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAX2Q96IS3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAX2Q96IS3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAX2Q96IS3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAX2Q96IS3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAX2Q96IS3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
RAX2Q96IS3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAX2Q96IS3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.28■□□□□ 0.2
RAX2Q96IS3 AC005181.1-201ENST00000604782 1256 ntBASIC16.28■□□□□ 0.2
RAX2Q96IS3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAX2Q96IS3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAX2Q96IS3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC16.28■□□□□ 0.2
RAX2Q96IS3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAX2Q96IS3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAX2Q96IS3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAX2Q96IS3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.28■□□□□ 0.2
RAX2Q96IS3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.27■□□□□ 0.2
RAX2Q96IS3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAX2Q96IS3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAX2Q96IS3 GPX1P1-201ENST00000388829 606 ntBASIC16.27■□□□□ 0.2
RAX2Q96IS3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.27■□□□□ 0.2
RAX2Q96IS3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.27■□□□□ 0.2
RAX2Q96IS3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.27■□□□□ 0.2
RAX2Q96IS3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAX2Q96IS3 AC008175.2-201ENST00000612840 297 ntBASIC16.27■□□□□ 0.2
RAX2Q96IS3 AL050303.2-201ENST00000619798 666 ntBASIC16.27■□□□□ 0.2
RAX2Q96IS3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.27■□□□□ 0.2
RAX2Q96IS3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAX2Q96IS3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAX2Q96IS3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RAX2Q96IS3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAX2Q96IS3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAX2Q96IS3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.27■□□□□ 0.19
RAX2Q96IS3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
RAX2Q96IS3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAX2Q96IS3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAX2Q96IS3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RAX2Q96IS3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAX2Q96IS3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAX2Q96IS3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAX2Q96IS3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAX2Q96IS3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAX2Q96IS3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAX2Q96IS3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAX2Q96IS3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RAX2Q96IS3 CNN2P6-201ENST00000439038 900 ntBASIC16.26■□□□□ 0.19
RAX2Q96IS3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.26■□□□□ 0.19
RAX2Q96IS3 SLC7A5P1-201ENST00000568957 537 ntBASIC16.26■□□□□ 0.19
RAX2Q96IS3 AC120498.10-201ENST00000621827 505 ntBASIC16.26■□□□□ 0.19
RAX2Q96IS3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RAX2Q96IS3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAX2Q96IS3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RAX2Q96IS3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAX2Q96IS3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAX2Q96IS3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAX2Q96IS3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RAX2Q96IS3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAX2Q96IS3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAX2Q96IS3 AC003102.1-202ENST00000563394 1796 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms