Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SHC3Q92529 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SHC3Q92529 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
SHC3Q92529 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SHC3Q92529 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SHC3Q92529 AP004607.4-201ENST00000530158 1459 ntBASIC22.39■■□□□ 1.17
SHC3Q92529 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SHC3Q92529 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.39■■□□□ 1.17
SHC3Q92529 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SHC3Q92529 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
SHC3Q92529 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.38■■□□□ 1.17
SHC3Q92529 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
SHC3Q92529 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.38■■□□□ 1.17
SHC3Q92529 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SHC3Q92529 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SHC3Q92529 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.38■■□□□ 1.17
SHC3Q92529 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.38■■□□□ 1.17
SHC3Q92529 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.38■■□□□ 1.17
SHC3Q92529 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.38■■□□□ 1.17
SHC3Q92529 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SHC3Q92529 AC104187.1-201ENST00000607510 612 ntBASIC22.38■■□□□ 1.17
SHC3Q92529 AC008175.2-201ENST00000612840 297 ntBASIC22.38■■□□□ 1.17
SHC3Q92529 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.38■■□□□ 1.17
SHC3Q92529 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SHC3Q92529 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SHC3Q92529 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SHC3Q92529 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SHC3Q92529 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SHC3Q92529 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.37■■□□□ 1.17
SHC3Q92529 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
SHC3Q92529 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.37■■□□□ 1.17
SHC3Q92529 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.37■■□□□ 1.17
SHC3Q92529 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.37■■□□□ 1.17
SHC3Q92529 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.37■■□□□ 1.17
SHC3Q92529 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SHC3Q92529 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
SHC3Q92529 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SHC3Q92529 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.37■■□□□ 1.17
SHC3Q92529 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.36■■□□□ 1.17
SHC3Q92529 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
SHC3Q92529 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SHC3Q92529 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
SHC3Q92529 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SHC3Q92529 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SHC3Q92529 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
SHC3Q92529 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SHC3Q92529 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.36■■□□□ 1.17
SHC3Q92529 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SHC3Q92529 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.36■■□□□ 1.17
SHC3Q92529 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.36■■□□□ 1.17
SHC3Q92529 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
SHC3Q92529 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SHC3Q92529 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SHC3Q92529 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC22.36■■□□□ 1.17
SHC3Q92529 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
SHC3Q92529 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.36■■□□□ 1.17
SHC3Q92529 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SHC3Q92529 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
SHC3Q92529 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SHC3Q92529 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SHC3Q92529 AC004854.2-201ENST00000608450 1441 ntBASIC22.35■■□□□ 1.17
SHC3Q92529 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SHC3Q92529 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SHC3Q92529 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.35■■□□□ 1.17
SHC3Q92529 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.35■■□□□ 1.17
SHC3Q92529 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SHC3Q92529 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SHC3Q92529 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.35■■□□□ 1.17
SHC3Q92529 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.35■■□□□ 1.17
SHC3Q92529 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SHC3Q92529 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.35■■□□□ 1.17
SHC3Q92529 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SHC3Q92529 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SHC3Q92529 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SHC3Q92529 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SHC3Q92529 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SHC3Q92529 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SHC3Q92529 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SHC3Q92529 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
SHC3Q92529 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
SHC3Q92529 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
SHC3Q92529 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
SHC3Q92529 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.34■■□□□ 1.17
SHC3Q92529 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SHC3Q92529 DUX4L2-201ENST00000561772 1275 ntBASIC22.34■■□□□ 1.17
SHC3Q92529 KRT18P61-201ENST00000585825 1298 ntBASIC22.34■■□□□ 1.17
SHC3Q92529 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.34■■□□□ 1.17
SHC3Q92529 DUX4L6-201ENST00000626483 1275 ntBASIC22.34■■□□□ 1.17
SHC3Q92529 DUX4L1-201ENST00000627662 1275 ntBASIC22.34■■□□□ 1.17
SHC3Q92529 DUX4L8-201ENST00000629013 1275 ntBASIC22.34■■□□□ 1.17
SHC3Q92529 DUX4L3-201ENST00000630187 1275 ntBASIC22.34■■□□□ 1.17
SHC3Q92529 DUX4L7-201ENST00000630678 1275 ntBASIC22.34■■□□□ 1.17
SHC3Q92529 DUX4L5-201ENST00000630834 1275 ntBASIC22.34■■□□□ 1.17
SHC3Q92529 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SHC3Q92529 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SHC3Q92529 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SHC3Q92529 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SHC3Q92529 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SHC3Q92529 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SHC3Q92529 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms