Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MBD3L1Q8WWY6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MBD3L1Q8WWY6 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MBD3L1Q8WWY6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
MBD3L1Q8WWY6 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.44■□□□□ 0.22
MBD3L1Q8WWY6 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC16.44■□□□□ 0.22
MBD3L1Q8WWY6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
MBD3L1Q8WWY6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MBD3L1Q8WWY6 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
MBD3L1Q8WWY6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
MBD3L1Q8WWY6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MBD3L1Q8WWY6 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MBD3L1Q8WWY6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MBD3L1Q8WWY6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MBD3L1Q8WWY6 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
MBD3L1Q8WWY6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MBD3L1Q8WWY6 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MBD3L1Q8WWY6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.44■□□□□ 0.22
MBD3L1Q8WWY6 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MBD3L1Q8WWY6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MBD3L1Q8WWY6 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MBD3L1Q8WWY6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MBD3L1Q8WWY6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
MBD3L1Q8WWY6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
MBD3L1Q8WWY6 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MBD3L1Q8WWY6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
MBD3L1Q8WWY6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.43■□□□□ 0.22
MBD3L1Q8WWY6 AL512408.1-201ENST00000569378 2000 ntBASIC16.43■□□□□ 0.22
MBD3L1Q8WWY6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MBD3L1Q8WWY6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MBD3L1Q8WWY6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MBD3L1Q8WWY6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.43■□□□□ 0.22
MBD3L1Q8WWY6 AC121338.2-201ENST00000622535 1744 ntBASIC16.43■□□□□ 0.22
MBD3L1Q8WWY6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.43■□□□□ 0.22
MBD3L1Q8WWY6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.43■□□□□ 0.22
MBD3L1Q8WWY6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MBD3L1Q8WWY6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MBD3L1Q8WWY6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.43■□□□□ 0.22
MBD3L1Q8WWY6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
MBD3L1Q8WWY6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MBD3L1Q8WWY6 AC098818.2-201ENST00000564925 2320 ntBASIC16.43■□□□□ 0.22
MBD3L1Q8WWY6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MBD3L1Q8WWY6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.43■□□□□ 0.22
MBD3L1Q8WWY6 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MBD3L1Q8WWY6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
MBD3L1Q8WWY6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MBD3L1Q8WWY6 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MBD3L1Q8WWY6 AC099778.1-201ENST00000568593 1911 ntBASIC16.43■□□□□ 0.22
MBD3L1Q8WWY6 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MBD3L1Q8WWY6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MBD3L1Q8WWY6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MBD3L1Q8WWY6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
MBD3L1Q8WWY6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MBD3L1Q8WWY6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MBD3L1Q8WWY6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.42■□□□□ 0.22
MBD3L1Q8WWY6 AC003102.1-202ENST00000563394 1796 ntBASIC16.42■□□□□ 0.22
MBD3L1Q8WWY6 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MBD3L1Q8WWY6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MBD3L1Q8WWY6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.42■□□□□ 0.22
MBD3L1Q8WWY6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MBD3L1Q8WWY6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.42■□□□□ 0.22
MBD3L1Q8WWY6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
MBD3L1Q8WWY6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MBD3L1Q8WWY6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.42■□□□□ 0.22
MBD3L1Q8WWY6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.42■□□□□ 0.22
MBD3L1Q8WWY6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MBD3L1Q8WWY6 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MBD3L1Q8WWY6 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
MBD3L1Q8WWY6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MBD3L1Q8WWY6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
MBD3L1Q8WWY6 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MBD3L1Q8WWY6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MBD3L1Q8WWY6 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
MBD3L1Q8WWY6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
MBD3L1Q8WWY6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MBD3L1Q8WWY6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.41■□□□□ 0.22
MBD3L1Q8WWY6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MBD3L1Q8WWY6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MBD3L1Q8WWY6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MBD3L1Q8WWY6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MBD3L1Q8WWY6 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
MBD3L1Q8WWY6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MBD3L1Q8WWY6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
MBD3L1Q8WWY6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
MBD3L1Q8WWY6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MBD3L1Q8WWY6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MBD3L1Q8WWY6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
MBD3L1Q8WWY6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MBD3L1Q8WWY6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MBD3L1Q8WWY6 AC009102.2-201ENST00000606772 1639 ntBASIC16.41■□□□□ 0.22
MBD3L1Q8WWY6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
MBD3L1Q8WWY6 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MBD3L1Q8WWY6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
MBD3L1Q8WWY6 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MBD3L1Q8WWY6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
MBD3L1Q8WWY6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MBD3L1Q8WWY6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.4■□□□□ 0.22
MBD3L1Q8WWY6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
MBD3L1Q8WWY6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MBD3L1Q8WWY6 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms