Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CHD5Q8TDI0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CHD5Q8TDI0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHD5Q8TDI0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CHD5Q8TDI0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHD5Q8TDI0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.34■■□□□ 1.01
CHD5Q8TDI0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CHD5Q8TDI0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHD5Q8TDI0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CHD5Q8TDI0 AC026310.3-201ENST00000625186 2373 ntBASIC21.34■■□□□ 1.01
CHD5Q8TDI0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CHD5Q8TDI0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHD5Q8TDI0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHD5Q8TDI0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHD5Q8TDI0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.34■■□□□ 1.01
CHD5Q8TDI0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHD5Q8TDI0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CHD5Q8TDI0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CHD5Q8TDI0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHD5Q8TDI0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHD5Q8TDI0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHD5Q8TDI0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.33■■□□□ 1.01
CHD5Q8TDI0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CHD5Q8TDI0 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHD5Q8TDI0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.33■■□□□ 1.01
CHD5Q8TDI0 AC068338.2-201ENST00000563278 1430 ntBASIC21.33■■□□□ 1.01
CHD5Q8TDI0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHD5Q8TDI0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHD5Q8TDI0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CHD5Q8TDI0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
CHD5Q8TDI0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.33■■□□□ 1.01
CHD5Q8TDI0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.33■■□□□ 1.01
CHD5Q8TDI0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHD5Q8TDI0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHD5Q8TDI0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.33■■□□□ 1
CHD5Q8TDI0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CHD5Q8TDI0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.33■■□□□ 1
CHD5Q8TDI0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHD5Q8TDI0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHD5Q8TDI0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHD5Q8TDI0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHD5Q8TDI0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHD5Q8TDI0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CHD5Q8TDI0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CHD5Q8TDI0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHD5Q8TDI0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHD5Q8TDI0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.32■■□□□ 1
CHD5Q8TDI0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHD5Q8TDI0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CHD5Q8TDI0 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CHD5Q8TDI0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.32■■□□□ 1
CHD5Q8TDI0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHD5Q8TDI0 AC091799.1-201ENST00000422823 811 ntBASIC21.32■■□□□ 1
CHD5Q8TDI0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHD5Q8TDI0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.32■■□□□ 1
CHD5Q8TDI0 AL162412.1-201ENST00000567129 965 ntBASIC21.32■■□□□ 1
CHD5Q8TDI0 AC011767.1-201ENST00000617410 1153 ntBASIC21.32■■□□□ 1
CHD5Q8TDI0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHD5Q8TDI0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.32■■□□□ 1
CHD5Q8TDI0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CHD5Q8TDI0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHD5Q8TDI0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
CHD5Q8TDI0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHD5Q8TDI0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.31■■□□□ 1
CHD5Q8TDI0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHD5Q8TDI0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.31■■□□□ 1
CHD5Q8TDI0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CHD5Q8TDI0 CYP2T1P-201ENST00000432607 1285 ntBASIC21.31■■□□□ 1
CHD5Q8TDI0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.31■■□□□ 1
CHD5Q8TDI0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHD5Q8TDI0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.31■■□□□ 1
CHD5Q8TDI0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CHD5Q8TDI0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.31■■□□□ 1
CHD5Q8TDI0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHD5Q8TDI0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
CHD5Q8TDI0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.3■■□□□ 1
CHD5Q8TDI0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CHD5Q8TDI0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHD5Q8TDI0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.3■■□□□ 1
CHD5Q8TDI0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHD5Q8TDI0 FEM1AP4-201ENST00000443167 1987 ntBASIC21.3■■□□□ 1
CHD5Q8TDI0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.3■■□□□ 1
CHD5Q8TDI0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.3■■□□□ 1
CHD5Q8TDI0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.3■■□□□ 1
CHD5Q8TDI0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.3■■□□□ 1
CHD5Q8TDI0 CROCCP5-201ENST00000436658 830 ntBASIC21.3■■□□□ 1
CHD5Q8TDI0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
CHD5Q8TDI0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHD5Q8TDI0 AL024507.2-201ENST00000606070 2574 ntBASIC21.3■■□□□ 1
CHD5Q8TDI0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHD5Q8TDI0 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHD5Q8TDI0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.29■■□□□ 1
CHD5Q8TDI0 AC007322.3-201ENST00000426526 701 ntBASIC21.29■■□□□ 1
CHD5Q8TDI0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHD5Q8TDI0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHD5Q8TDI0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.29■■□□□ 1
CHD5Q8TDI0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.29■■□□□ 1
CHD5Q8TDI0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHD5Q8TDI0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CHD5Q8TDI0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms