Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.87■■□□□ 1.09
SMRP1Q8NCR6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.87■■□□□ 1.09
SMRP1Q8NCR6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SMRP1Q8NCR6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMRP1Q8NCR6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.87■■□□□ 1.09
SMRP1Q8NCR6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMRP1Q8NCR6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.86■■□□□ 1.09
SMRP1Q8NCR6 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SMRP1Q8NCR6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMRP1Q8NCR6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMRP1Q8NCR6 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.86■■□□□ 1.09
SMRP1Q8NCR6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
SMRP1Q8NCR6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.86■■□□□ 1.09
SMRP1Q8NCR6 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
SMRP1Q8NCR6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SMRP1Q8NCR6 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.86■■□□□ 1.09
SMRP1Q8NCR6 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.85■■□□□ 1.09
SMRP1Q8NCR6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMRP1Q8NCR6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMRP1Q8NCR6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
SMRP1Q8NCR6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.85■■□□□ 1.09
SMRP1Q8NCR6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
SMRP1Q8NCR6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.85■■□□□ 1.09
SMRP1Q8NCR6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SMRP1Q8NCR6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.85■■□□□ 1.09
SMRP1Q8NCR6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SMRP1Q8NCR6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMRP1Q8NCR6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMRP1Q8NCR6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMRP1Q8NCR6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMRP1Q8NCR6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMRP1Q8NCR6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMRP1Q8NCR6 POM121L13P-201ENST00000422362 380 ntBASIC21.84■■□□□ 1.09
SMRP1Q8NCR6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMRP1Q8NCR6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMRP1Q8NCR6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.84■■□□□ 1.09
SMRP1Q8NCR6 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.84■■□□□ 1.09
SMRP1Q8NCR6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.84■■□□□ 1.09
SMRP1Q8NCR6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
SMRP1Q8NCR6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.84■■□□□ 1.09
SMRP1Q8NCR6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.84■■□□□ 1.09
SMRP1Q8NCR6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.84■■□□□ 1.09
SMRP1Q8NCR6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMRP1Q8NCR6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.84■■□□□ 1.09
SMRP1Q8NCR6 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.84■■□□□ 1.09
SMRP1Q8NCR6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMRP1Q8NCR6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMRP1Q8NCR6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
SMRP1Q8NCR6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMRP1Q8NCR6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.83■■□□□ 1.09
SMRP1Q8NCR6 KRT18P68-201ENST00000392293 1000 ntBASIC21.83■■□□□ 1.09
SMRP1Q8NCR6 RPS2P55-201ENST00000397318 883 ntBASIC21.83■■□□□ 1.09
SMRP1Q8NCR6 AC245052.3-201ENST00000450182 901 ntBASIC21.83■■□□□ 1.09
SMRP1Q8NCR6 AC107956.1-201ENST00000494359 873 ntBASIC21.83■■□□□ 1.09
SMRP1Q8NCR6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.83■■□□□ 1.09
SMRP1Q8NCR6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SMRP1Q8NCR6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SMRP1Q8NCR6 KRT17P2-201ENST00000300992 1314 ntBASIC21.82■■□□□ 1.08
SMRP1Q8NCR6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.82■■□□□ 1.08
SMRP1Q8NCR6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.82■■□□□ 1.08
SMRP1Q8NCR6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMRP1Q8NCR6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
SMRP1Q8NCR6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMRP1Q8NCR6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.82■■□□□ 1.08
SMRP1Q8NCR6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMRP1Q8NCR6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.82■■□□□ 1.08
SMRP1Q8NCR6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMRP1Q8NCR6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.82■■□□□ 1.08
SMRP1Q8NCR6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.82■■□□□ 1.08
SMRP1Q8NCR6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
SMRP1Q8NCR6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.82■■□□□ 1.08
SMRP1Q8NCR6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMRP1Q8NCR6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMRP1Q8NCR6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
SMRP1Q8NCR6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
SMRP1Q8NCR6 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMRP1Q8NCR6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SMRP1Q8NCR6 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMRP1Q8NCR6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMRP1Q8NCR6 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.81■■□□□ 1.08
SMRP1Q8NCR6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMRP1Q8NCR6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SMRP1Q8NCR6 TSPY7P-201ENST00000431358 1114 ntBASIC21.81■■□□□ 1.08
SMRP1Q8NCR6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.81■■□□□ 1.08
SMRP1Q8NCR6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMRP1Q8NCR6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMRP1Q8NCR6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.81■■□□□ 1.08
SMRP1Q8NCR6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.81■■□□□ 1.08
SMRP1Q8NCR6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.81■■□□□ 1.08
SMRP1Q8NCR6 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMRP1Q8NCR6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.81■■□□□ 1.08
SMRP1Q8NCR6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMRP1Q8NCR6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
SMRP1Q8NCR6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMRP1Q8NCR6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SMRP1Q8NCR6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.8■■□□□ 1.08
SMRP1Q8NCR6 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMRP1Q8NCR6 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMRP1Q8NCR6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMRP1Q8NCR6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms