Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 Z98882.1-201ENST00000622160 2253 ntBASIC19.43■□□□□ 0.7
C9orf40Q8IXQ3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.43■□□□□ 0.7
C9orf40Q8IXQ3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.43■□□□□ 0.7
C9orf40Q8IXQ3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.43■□□□□ 0.7
C9orf40Q8IXQ3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.43■□□□□ 0.7
C9orf40Q8IXQ3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.43■□□□□ 0.7
C9orf40Q8IXQ3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.43■□□□□ 0.7
C9orf40Q8IXQ3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf40Q8IXQ3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.43■□□□□ 0.7
C9orf40Q8IXQ3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.43■□□□□ 0.7
C9orf40Q8IXQ3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
C9orf40Q8IXQ3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.43■□□□□ 0.7
C9orf40Q8IXQ3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.43■□□□□ 0.7
C9orf40Q8IXQ3 AC080038.1-201ENST00000611274 1154 ntBASIC19.43■□□□□ 0.7
C9orf40Q8IXQ3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf40Q8IXQ3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf40Q8IXQ3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf40Q8IXQ3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf40Q8IXQ3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf40Q8IXQ3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf40Q8IXQ3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C9orf40Q8IXQ3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
C9orf40Q8IXQ3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
C9orf40Q8IXQ3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.42■□□□□ 0.7
C9orf40Q8IXQ3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
C9orf40Q8IXQ3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.42■□□□□ 0.7
C9orf40Q8IXQ3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C9orf40Q8IXQ3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.41■□□□□ 0.7
C9orf40Q8IXQ3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C9orf40Q8IXQ3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
C9orf40Q8IXQ3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C9orf40Q8IXQ3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C9orf40Q8IXQ3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
C9orf40Q8IXQ3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
C9orf40Q8IXQ3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.41■□□□□ 0.7
C9orf40Q8IXQ3 AC010536.3-201ENST00000620306 533 ntBASIC19.41■□□□□ 0.7
C9orf40Q8IXQ3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C9orf40Q8IXQ3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
C9orf40Q8IXQ3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.4■□□□□ 0.7
C9orf40Q8IXQ3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf40Q8IXQ3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
C9orf40Q8IXQ3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf40Q8IXQ3 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.4■□□□□ 0.7
C9orf40Q8IXQ3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf40Q8IXQ3 AC073111.5-205ENST00000641717 521 ntBASIC19.4■□□□□ 0.7
C9orf40Q8IXQ3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.4■□□□□ 0.7
C9orf40Q8IXQ3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf40Q8IXQ3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.4■□□□□ 0.7
C9orf40Q8IXQ3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf40Q8IXQ3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf40Q8IXQ3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf40Q8IXQ3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf40Q8IXQ3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf40Q8IXQ3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
C9orf40Q8IXQ3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C9orf40Q8IXQ3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.39■□□□□ 0.69
C9orf40Q8IXQ3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
C9orf40Q8IXQ3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
C9orf40Q8IXQ3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C9orf40Q8IXQ3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C9orf40Q8IXQ3 CDCA4P2-201ENST00000441182 718 ntBASIC19.39■□□□□ 0.69
C9orf40Q8IXQ3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.39■□□□□ 0.69
C9orf40Q8IXQ3 DUX4L16-201ENST00000555130 1264 ntBASIC19.39■□□□□ 0.69
C9orf40Q8IXQ3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
C9orf40Q8IXQ3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C9orf40Q8IXQ3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
C9orf40Q8IXQ3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.39■□□□□ 0.69
C9orf40Q8IXQ3 RARRES2P11-201ENST00000635158 484 ntBASIC19.39■□□□□ 0.69
C9orf40Q8IXQ3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C9orf40Q8IXQ3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.39■□□□□ 0.69
C9orf40Q8IXQ3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C9orf40Q8IXQ3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C9orf40Q8IXQ3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.39■□□□□ 0.69
C9orf40Q8IXQ3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C9orf40Q8IXQ3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C9orf40Q8IXQ3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
C9orf40Q8IXQ3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
C9orf40Q8IXQ3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
C9orf40Q8IXQ3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
C9orf40Q8IXQ3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.38■□□□□ 0.69
C9orf40Q8IXQ3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
C9orf40Q8IXQ3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
C9orf40Q8IXQ3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.38■□□□□ 0.69
C9orf40Q8IXQ3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
C9orf40Q8IXQ3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
C9orf40Q8IXQ3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
C9orf40Q8IXQ3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.37■□□□□ 0.69
C9orf40Q8IXQ3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
C9orf40Q8IXQ3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
C9orf40Q8IXQ3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
C9orf40Q8IXQ3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
C9orf40Q8IXQ3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
C9orf40Q8IXQ3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
C9orf40Q8IXQ3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
C9orf40Q8IXQ3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
C9orf40Q8IXQ3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
C9orf40Q8IXQ3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
C9orf40Q8IXQ3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.37■□□□□ 0.69
C9orf40Q8IXQ3 RAP2CP1-201ENST00000605103 478 ntBASIC19.37■□□□□ 0.69
C9orf40Q8IXQ3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms