Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CSMD2Q7Z408 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSMD2Q7Z408 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.45
CSMD2Q7Z408 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CSMD2Q7Z408 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.89■□□□□ 0.45
CSMD2Q7Z408 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.89■□□□□ 0.45
CSMD2Q7Z408 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CSMD2Q7Z408 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSMD2Q7Z408 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSMD2Q7Z408 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSMD2Q7Z408 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CSMD2Q7Z408 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.88■□□□□ 0.45
CSMD2Q7Z408 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CSMD2Q7Z408 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.88■□□□□ 0.45
CSMD2Q7Z408 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CSMD2Q7Z408 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CSMD2Q7Z408 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CSMD2Q7Z408 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CSMD2Q7Z408 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.88■□□□□ 0.45
CSMD2Q7Z408 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CSMD2Q7Z408 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSMD2Q7Z408 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSMD2Q7Z408 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17.87■□□□□ 0.45
CSMD2Q7Z408 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSMD2Q7Z408 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CSMD2Q7Z408 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.87■□□□□ 0.45
CSMD2Q7Z408 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.87■□□□□ 0.45
CSMD2Q7Z408 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.87■□□□□ 0.45
CSMD2Q7Z408 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSMD2Q7Z408 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CSMD2Q7Z408 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CSMD2Q7Z408 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CSMD2Q7Z408 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CSMD2Q7Z408 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSMD2Q7Z408 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CSMD2Q7Z408 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.87■□□□□ 0.45
CSMD2Q7Z408 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.87■□□□□ 0.45
CSMD2Q7Z408 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSMD2Q7Z408 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.87■□□□□ 0.45
CSMD2Q7Z408 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.87■□□□□ 0.45
CSMD2Q7Z408 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSMD2Q7Z408 KRT17P2-201ENST00000300992 1314 ntBASIC17.86■□□□□ 0.45
CSMD2Q7Z408 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSMD2Q7Z408 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSMD2Q7Z408 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.86■□□□□ 0.45
CSMD2Q7Z408 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.86■□□□□ 0.45
CSMD2Q7Z408 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
CSMD2Q7Z408 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSMD2Q7Z408 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CSMD2Q7Z408 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
CSMD2Q7Z408 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.86■□□□□ 0.45
CSMD2Q7Z408 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.86■□□□□ 0.45
CSMD2Q7Z408 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSMD2Q7Z408 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.86■□□□□ 0.45
CSMD2Q7Z408 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.86■□□□□ 0.45
CSMD2Q7Z408 LSM12P1-201ENST00000411836 588 ntBASIC17.86■□□□□ 0.45
CSMD2Q7Z408 KRT16P2-201ENST00000414673 1423 ntBASIC17.86■□□□□ 0.45
CSMD2Q7Z408 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CSMD2Q7Z408 POM121L13P-201ENST00000422362 380 ntBASIC17.85■□□□□ 0.45
CSMD2Q7Z408 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.85■□□□□ 0.45
CSMD2Q7Z408 EED-207ENST00000528180 1745 ntTSL 5 BASIC17.85■□□□□ 0.45
CSMD2Q7Z408 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.85■□□□□ 0.45
CSMD2Q7Z408 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CSMD2Q7Z408 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
CSMD2Q7Z408 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.85■□□□□ 0.45
CSMD2Q7Z408 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.85■□□□□ 0.45
CSMD2Q7Z408 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSMD2Q7Z408 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSMD2Q7Z408 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSMD2Q7Z408 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.85■□□□□ 0.45
CSMD2Q7Z408 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSMD2Q7Z408 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.85■□□□□ 0.45
CSMD2Q7Z408 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSMD2Q7Z408 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSMD2Q7Z408 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC17.84■□□□□ 0.45
CSMD2Q7Z408 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CSMD2Q7Z408 AC053503.5-201ENST00000601508 636 ntBASIC17.84■□□□□ 0.45
CSMD2Q7Z408 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.84■□□□□ 0.45
CSMD2Q7Z408 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSMD2Q7Z408 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.84■□□□□ 0.45
CSMD2Q7Z408 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CSMD2Q7Z408 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.84■□□□□ 0.45
CSMD2Q7Z408 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CSMD2Q7Z408 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.84■□□□□ 0.45
CSMD2Q7Z408 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CSMD2Q7Z408 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSMD2Q7Z408 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CSMD2Q7Z408 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CSMD2Q7Z408 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CSMD2Q7Z408 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.83■□□□□ 0.45
CSMD2Q7Z408 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CSMD2Q7Z408 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.83■□□□□ 0.45
CSMD2Q7Z408 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.83■□□□□ 0.45
CSMD2Q7Z408 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CSMD2Q7Z408 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CSMD2Q7Z408 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CSMD2Q7Z408 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSMD2Q7Z408 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.83■□□□□ 0.44
CSMD2Q7Z408 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.83■□□□□ 0.44
CSMD2Q7Z408 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms