Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TMEM53Q6P2H8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM53Q6P2H8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TMEM53Q6P2H8 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
TMEM53Q6P2H8 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM53Q6P2H8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM53Q6P2H8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
TMEM53Q6P2H8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM53Q6P2H8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM53Q6P2H8 AC099791.1-201ENST00000416440 715 ntBASIC19.06■□□□□ 0.64
TMEM53Q6P2H8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM53Q6P2H8 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM53Q6P2H8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.06■□□□□ 0.64
TMEM53Q6P2H8 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM53Q6P2H8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM53Q6P2H8 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM53Q6P2H8 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM53Q6P2H8 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM53Q6P2H8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TMEM53Q6P2H8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
TMEM53Q6P2H8 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM53Q6P2H8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM53Q6P2H8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM53Q6P2H8 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM53Q6P2H8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM53Q6P2H8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TMEM53Q6P2H8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.05■□□□□ 0.64
TMEM53Q6P2H8 AP001330.3-201ENST00000520123 633 ntBASIC19.05■□□□□ 0.64
TMEM53Q6P2H8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.05■□□□□ 0.64
TMEM53Q6P2H8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.05■□□□□ 0.64
TMEM53Q6P2H8 AF213884.3-201ENST00000563833 479 ntBASIC19.05■□□□□ 0.64
TMEM53Q6P2H8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.05■□□□□ 0.64
TMEM53Q6P2H8 CA15P2-201ENST00000611168 834 ntBASIC19.05■□□□□ 0.64
TMEM53Q6P2H8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.05■□□□□ 0.64
TMEM53Q6P2H8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM53Q6P2H8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM53Q6P2H8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM53Q6P2H8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM53Q6P2H8 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM53Q6P2H8 AC087742.1-201ENST00000575880 1738 ntBASIC19.05■□□□□ 0.64
TMEM53Q6P2H8 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM53Q6P2H8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM53Q6P2H8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM53Q6P2H8 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM53Q6P2H8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TMEM53Q6P2H8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.05■□□□□ 0.64
TMEM53Q6P2H8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.05■□□□□ 0.64
TMEM53Q6P2H8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.05■□□□□ 0.64
TMEM53Q6P2H8 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM53Q6P2H8 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM53Q6P2H8 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM53Q6P2H8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM53Q6P2H8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM53Q6P2H8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM53Q6P2H8 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.04■□□□□ 0.64
TMEM53Q6P2H8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM53Q6P2H8 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM53Q6P2H8 AC142381.2-201ENST00000566120 298 ntBASIC19.04■□□□□ 0.64
TMEM53Q6P2H8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM53Q6P2H8 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.04■□□□□ 0.64
TMEM53Q6P2H8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.04■□□□□ 0.64
TMEM53Q6P2H8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM53Q6P2H8 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM53Q6P2H8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
TMEM53Q6P2H8 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM53Q6P2H8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
TMEM53Q6P2H8 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.03■□□□□ 0.64
TMEM53Q6P2H8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM53Q6P2H8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM53Q6P2H8 MIR939-201ENST00000401314 82 ntBASIC19.03■□□□□ 0.64
TMEM53Q6P2H8 AC091305.1-201ENST00000479476 895 ntBASIC19.03■□□□□ 0.64
TMEM53Q6P2H8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.03■□□□□ 0.64
TMEM53Q6P2H8 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM53Q6P2H8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TMEM53Q6P2H8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM53Q6P2H8 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM53Q6P2H8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM53Q6P2H8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM53Q6P2H8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.03■□□□□ 0.64
TMEM53Q6P2H8 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
TMEM53Q6P2H8 RASA4CP-201ENST00000424092 1398 ntBASIC19.03■□□□□ 0.64
TMEM53Q6P2H8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
TMEM53Q6P2H8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM53Q6P2H8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
TMEM53Q6P2H8 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM53Q6P2H8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.03■□□□□ 0.64
TMEM53Q6P2H8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.02■□□□□ 0.64
TMEM53Q6P2H8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.02■□□□□ 0.64
TMEM53Q6P2H8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TMEM53Q6P2H8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
TMEM53Q6P2H8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.02■□□□□ 0.64
TMEM53Q6P2H8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM53Q6P2H8 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
TMEM53Q6P2H8 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM53Q6P2H8 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.02■□□□□ 0.64
TMEM53Q6P2H8 AC005837.3-201ENST00000612163 286 ntBASIC19.02■□□□□ 0.64
TMEM53Q6P2H8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM53Q6P2H8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
TMEM53Q6P2H8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
TMEM53Q6P2H8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms