Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.03■□□□□ 0.8
CDCP2Q5VXM1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCP2Q5VXM1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCP2Q5VXM1 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCP2Q5VXM1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCP2Q5VXM1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDCP2Q5VXM1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDCP2Q5VXM1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CDCP2Q5VXM1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.02■□□□□ 0.8
CDCP2Q5VXM1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDCP2Q5VXM1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDCP2Q5VXM1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDCP2Q5VXM1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDCP2Q5VXM1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
CDCP2Q5VXM1 CDV3P1-201ENST00000471403 739 ntBASIC20.02■□□□□ 0.8
CDCP2Q5VXM1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.02■□□□□ 0.8
CDCP2Q5VXM1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDCP2Q5VXM1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDCP2Q5VXM1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDCP2Q5VXM1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
CDCP2Q5VXM1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CDCP2Q5VXM1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDCP2Q5VXM1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDCP2Q5VXM1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
CDCP2Q5VXM1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
CDCP2Q5VXM1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDCP2Q5VXM1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDCP2Q5VXM1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.01■□□□□ 0.79
CDCP2Q5VXM1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CDCP2Q5VXM1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDCP2Q5VXM1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDCP2Q5VXM1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.01■□□□□ 0.79
CDCP2Q5VXM1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
CDCP2Q5VXM1 AL589743.5-201ENST00000616611 1050 ntBASIC20.01■□□□□ 0.79
CDCP2Q5VXM1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.01■□□□□ 0.79
CDCP2Q5VXM1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.01■□□□□ 0.79
CDCP2Q5VXM1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CDCP2Q5VXM1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
CDCP2Q5VXM1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CDCP2Q5VXM1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
CDCP2Q5VXM1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20■□□□□ 0.79
CDCP2Q5VXM1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CDCP2Q5VXM1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20■□□□□ 0.79
CDCP2Q5VXM1 AC245052.3-201ENST00000450182 901 ntBASIC20■□□□□ 0.79
CDCP2Q5VXM1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20■□□□□ 0.79
CDCP2Q5VXM1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CDCP2Q5VXM1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20■□□□□ 0.79
CDCP2Q5VXM1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20■□□□□ 0.79
CDCP2Q5VXM1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDCP2Q5VXM1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20■□□□□ 0.79
CDCP2Q5VXM1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDCP2Q5VXM1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
CDCP2Q5VXM1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDCP2Q5VXM1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CDCP2Q5VXM1 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CDCP2Q5VXM1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20■□□□□ 0.79
CDCP2Q5VXM1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDCP2Q5VXM1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDCP2Q5VXM1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CDCP2Q5VXM1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDCP2Q5VXM1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CDCP2Q5VXM1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
CDCP2Q5VXM1 MCRIP2P1-201ENST00000394346 511 ntBASIC19.99■□□□□ 0.79
CDCP2Q5VXM1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDCP2Q5VXM1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDCP2Q5VXM1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDCP2Q5VXM1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDCP2Q5VXM1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDCP2Q5VXM1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDCP2Q5VXM1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDCP2Q5VXM1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDCP2Q5VXM1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CDCP2Q5VXM1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDCP2Q5VXM1 RPPH1-201ENST00000516869 333 ntBASIC19.98■□□□□ 0.79
CDCP2Q5VXM1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.98■□□□□ 0.79
CDCP2Q5VXM1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDCP2Q5VXM1 PNMA6B-201ENST00000538162 1200 ntBASIC19.98■□□□□ 0.79
CDCP2Q5VXM1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.98■□□□□ 0.79
CDCP2Q5VXM1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.98■□□□□ 0.79
CDCP2Q5VXM1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDCP2Q5VXM1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.98■□□□□ 0.79
CDCP2Q5VXM1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CDCP2Q5VXM1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.98■□□□□ 0.79
CDCP2Q5VXM1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDCP2Q5VXM1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDCP2Q5VXM1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.97■□□□□ 0.79
CDCP2Q5VXM1 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDCP2Q5VXM1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.97■□□□□ 0.79
CDCP2Q5VXM1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
CDCP2Q5VXM1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.97■□□□□ 0.79
CDCP2Q5VXM1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDCP2Q5VXM1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDCP2Q5VXM1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.97■□□□□ 0.79
CDCP2Q5VXM1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.97■□□□□ 0.79
CDCP2Q5VXM1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.97■□□□□ 0.79
CDCP2Q5VXM1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.97■□□□□ 0.79
CDCP2Q5VXM1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.97■□□□□ 0.79
CDCP2Q5VXM1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDCP2Q5VXM1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.97■□□□□ 0.79
CDCP2Q5VXM1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms