Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
RC3H1Q5TC82 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
RC3H1Q5TC82 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
RC3H1Q5TC82 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.69■■□□□ 1.86
RC3H1Q5TC82 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RC3H1Q5TC82 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC26.69■■□□□ 1.86
RC3H1Q5TC82 C1QBPP2-201ENST00000528754 825 ntBASIC26.69■■□□□ 1.86
RC3H1Q5TC82 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC26.69■■□□□ 1.86
RC3H1Q5TC82 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
RC3H1Q5TC82 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC26.69■■□□□ 1.86
RC3H1Q5TC82 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
RC3H1Q5TC82 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
RC3H1Q5TC82 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
RC3H1Q5TC82 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
RC3H1Q5TC82 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
RC3H1Q5TC82 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC26.68■■□□□ 1.86
RC3H1Q5TC82 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
RC3H1Q5TC82 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RC3H1Q5TC82 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RC3H1Q5TC82 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
RC3H1Q5TC82 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC26.68■■□□□ 1.86
RC3H1Q5TC82 KRT18P68-201ENST00000392293 1000 ntBASIC26.68■■□□□ 1.86
RC3H1Q5TC82 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC26.68■■□□□ 1.86
RC3H1Q5TC82 Z99916.2-201ENST00000604037 246 ntBASIC26.68■■□□□ 1.86
RC3H1Q5TC82 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC26.68■■□□□ 1.86
RC3H1Q5TC82 FAM197Y4-202ENST00000622692 608 ntBASIC26.68■■□□□ 1.86
RC3H1Q5TC82 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
RC3H1Q5TC82 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC26.68■■□□□ 1.86
RC3H1Q5TC82 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC26.67■■□□□ 1.86
RC3H1Q5TC82 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
RC3H1Q5TC82 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
RC3H1Q5TC82 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
RC3H1Q5TC82 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC26.67■■□□□ 1.86
RC3H1Q5TC82 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC26.67■■□□□ 1.86
RC3H1Q5TC82 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC26.67■■□□□ 1.86
RC3H1Q5TC82 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
RC3H1Q5TC82 GCK-205ENST00000437084 1385 ntTSL 5 BASIC26.67■■□□□ 1.86
RC3H1Q5TC82 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
RC3H1Q5TC82 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
RC3H1Q5TC82 AC092368.3-202ENST00000574180 1591 ntBASIC26.67■■□□□ 1.86
RC3H1Q5TC82 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
RC3H1Q5TC82 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
RC3H1Q5TC82 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
RC3H1Q5TC82 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.66■■□□□ 1.86
RC3H1Q5TC82 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
RC3H1Q5TC82 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC26.66■■□□□ 1.86
RC3H1Q5TC82 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC26.66■■□□□ 1.86
RC3H1Q5TC82 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC26.66■■□□□ 1.86
RC3H1Q5TC82 AC073912.3-201ENST00000624414 853 ntBASIC26.66■■□□□ 1.86
RC3H1Q5TC82 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
RC3H1Q5TC82 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC26.66■■□□□ 1.86
RC3H1Q5TC82 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
RC3H1Q5TC82 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC26.65■■□□□ 1.86
RC3H1Q5TC82 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
RC3H1Q5TC82 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC26.65■■□□□ 1.86
RC3H1Q5TC82 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
RC3H1Q5TC82 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RC3H1Q5TC82 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RC3H1Q5TC82 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC26.65■■□□□ 1.86
RC3H1Q5TC82 SLC29A4P2-201ENST00000504749 1089 ntBASIC26.65■■□□□ 1.86
RC3H1Q5TC82 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC26.65■■□□□ 1.86
RC3H1Q5TC82 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC26.65■■□□□ 1.86
RC3H1Q5TC82 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC26.65■■□□□ 1.86
RC3H1Q5TC82 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC26.65■■□□□ 1.86
RC3H1Q5TC82 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RC3H1Q5TC82 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC26.65■■□□□ 1.86
RC3H1Q5TC82 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC26.65■■□□□ 1.86
RC3H1Q5TC82 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RC3H1Q5TC82 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC26.65■■□□□ 1.86
RC3H1Q5TC82 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
RC3H1Q5TC82 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC26.65■■□□□ 1.86
RC3H1Q5TC82 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
RC3H1Q5TC82 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC26.64■■□□□ 1.86
RC3H1Q5TC82 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
RC3H1Q5TC82 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC26.64■■□□□ 1.86
RC3H1Q5TC82 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC26.64■■□□□ 1.86
RC3H1Q5TC82 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC26.64■■□□□ 1.86
RC3H1Q5TC82 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC26.64■■□□□ 1.86
RC3H1Q5TC82 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
RC3H1Q5TC82 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC26.64■■□□□ 1.85
RC3H1Q5TC82 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC26.64■■□□□ 1.85
RC3H1Q5TC82 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
RC3H1Q5TC82 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC26.63■■□□□ 1.85
RC3H1Q5TC82 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC26.63■■□□□ 1.85
RC3H1Q5TC82 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC26.63■■□□□ 1.85
RC3H1Q5TC82 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
RC3H1Q5TC82 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC26.63■■□□□ 1.85
RC3H1Q5TC82 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC26.63■■□□□ 1.85
RC3H1Q5TC82 AC233263.1-201ENST00000578059 224 ntBASIC26.63■■□□□ 1.85
RC3H1Q5TC82 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC26.63■■□□□ 1.85
RC3H1Q5TC82 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RC3H1Q5TC82 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RC3H1Q5TC82 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
RC3H1Q5TC82 GXYLT1P3-201ENST00000453058 1193 ntBASIC26.62■■□□□ 1.85
RC3H1Q5TC82 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RC3H1Q5TC82 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RC3H1Q5TC82 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC26.62■■□□□ 1.85
RC3H1Q5TC82 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC26.62■■□□□ 1.85
RC3H1Q5TC82 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
RC3H1Q5TC82 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms