Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
SNAI3Q3KNW1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNAI3Q3KNW1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNAI3Q3KNW1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNAI3Q3KNW1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNAI3Q3KNW1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNAI3Q3KNW1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNAI3Q3KNW1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNAI3Q3KNW1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
SNAI3Q3KNW1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.16■□□□□ 0.5
SNAI3Q3KNW1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SNAI3Q3KNW1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNAI3Q3KNW1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SNAI3Q3KNW1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SNAI3Q3KNW1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNAI3Q3KNW1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNAI3Q3KNW1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNAI3Q3KNW1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNAI3Q3KNW1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.16■□□□□ 0.5
SNAI3Q3KNW1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNAI3Q3KNW1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNAI3Q3KNW1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.16■□□□□ 0.5
SNAI3Q3KNW1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNAI3Q3KNW1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNAI3Q3KNW1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNAI3Q3KNW1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SNAI3Q3KNW1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SNAI3Q3KNW1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNAI3Q3KNW1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.15■□□□□ 0.5
SNAI3Q3KNW1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.15■□□□□ 0.5
SNAI3Q3KNW1 YBX1P1-201ENST00000445822 960 ntBASIC18.15■□□□□ 0.5
SNAI3Q3KNW1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.15■□□□□ 0.5
SNAI3Q3KNW1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNAI3Q3KNW1 AC061975.6-201ENST00000579045 1553 ntBASIC18.15■□□□□ 0.5
SNAI3Q3KNW1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SNAI3Q3KNW1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SNAI3Q3KNW1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SNAI3Q3KNW1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNAI3Q3KNW1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.14■□□□□ 0.5
SNAI3Q3KNW1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNAI3Q3KNW1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNAI3Q3KNW1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SNAI3Q3KNW1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.14■□□□□ 0.49
SNAI3Q3KNW1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNAI3Q3KNW1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNAI3Q3KNW1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
SNAI3Q3KNW1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SNAI3Q3KNW1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNAI3Q3KNW1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.14■□□□□ 0.49
SNAI3Q3KNW1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.14■□□□□ 0.49
SNAI3Q3KNW1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNAI3Q3KNW1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNAI3Q3KNW1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
SNAI3Q3KNW1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.13■□□□□ 0.49
SNAI3Q3KNW1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNAI3Q3KNW1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.13■□□□□ 0.49
SNAI3Q3KNW1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.13■□□□□ 0.49
SNAI3Q3KNW1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.13■□□□□ 0.49
SNAI3Q3KNW1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNAI3Q3KNW1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNAI3Q3KNW1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.13■□□□□ 0.49
SNAI3Q3KNW1 AC123595.1-201ENST00000440769 1046 ntBASIC18.13■□□□□ 0.49
SNAI3Q3KNW1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.13■□□□□ 0.49
SNAI3Q3KNW1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.13■□□□□ 0.49
SNAI3Q3KNW1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNAI3Q3KNW1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNAI3Q3KNW1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.13■□□□□ 0.49
SNAI3Q3KNW1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.13■□□□□ 0.49
SNAI3Q3KNW1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNAI3Q3KNW1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNAI3Q3KNW1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SNAI3Q3KNW1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNAI3Q3KNW1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNAI3Q3KNW1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNAI3Q3KNW1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.13■□□□□ 0.49
SNAI3Q3KNW1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SNAI3Q3KNW1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNAI3Q3KNW1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.12■□□□□ 0.49
SNAI3Q3KNW1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNAI3Q3KNW1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNAI3Q3KNW1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNAI3Q3KNW1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SNAI3Q3KNW1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNAI3Q3KNW1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.12■□□□□ 0.49
SNAI3Q3KNW1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNAI3Q3KNW1 TERF1P2-201ENST00000583350 1212 ntBASIC18.12■□□□□ 0.49
SNAI3Q3KNW1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.12■□□□□ 0.49
SNAI3Q3KNW1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNAI3Q3KNW1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNAI3Q3KNW1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNAI3Q3KNW1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.11■□□□□ 0.49
SNAI3Q3KNW1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SNAI3Q3KNW1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNAI3Q3KNW1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNAI3Q3KNW1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.11■□□□□ 0.49
SNAI3Q3KNW1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.11■□□□□ 0.49
SNAI3Q3KNW1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.11■□□□□ 0.49
SNAI3Q3KNW1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.11■□□□□ 0.49
SNAI3Q3KNW1 CCDC92B-201ENST00000575506 885 ntBASIC18.11■□□□□ 0.49
SNAI3Q3KNW1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms