Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeastyeast

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM6Q06406 CTK1YKL139W 1587 nt1.47□□□□□ -2.17
LSM6Q06406 SMC6YLR383W 3345 nt1.46□□□□□ -2.17
LSM6Q06406 RPL13AYDL082W 600 nt1.46□□□□□ -2.18
LSM6Q06406 YOS1YER074W-A 258 nt1.46□□□□□ -2.18
LSM6Q06406 MRPL9YGR220C 810 nt1.46□□□□□ -2.18
LSM6Q06406 RSM26YJR101W 801 nt1.46□□□□□ -2.18
LSM6Q06406 YLR012CYLR012C 300 nt1.46□□□□□ -2.18
LSM6Q06406 IGO1YNL157W 507 nt1.46□□□□□ -2.18
LSM6Q06406 DUG3YNL191W 1074 nt1.46□□□□□ -2.18
LSM6Q06406 MRP2YPR166C 348 nt1.46□□□□□ -2.18
LSM6Q06406 BMT2YBR141C 1014 nt1.46□□□□□ -2.18
LSM6Q06406 KAR4YCL055W 1008 nt1.46□□□□□ -2.18
LSM6Q06406 YMR1YJR110W 2067 nt1.46□□□□□ -2.18
LSM6Q06406 CLG1YGL215W 1359 nt1.46□□□□□ -2.18
LSM6Q06406 UTP22YGR090W 3714 nt1.45□□□□□ -2.18
LSM6Q06406 TIM11YDR322C-A 291 nt1.45□□□□□ -2.18
LSM6Q06406 PHO92YDR374C 921 nt1.45□□□□□ -2.18
LSM6Q06406 YHR210CYHR210C 1026 nt1.45□□□□□ -2.18
LSM6Q06406 YKL162CYKL162C 1209 nt1.45□□□□□ -2.18
LSM6Q06406 TFA2YKR062W 987 nt1.45□□□□□ -2.18
LSM6Q06406 PAU8YAL068C 363 nt1.45□□□□□ -2.18
LSM6Q06406 RPL8BYLL045C 771 nt1.45□□□□□ -2.18
LSM6Q06406 MED11YMR112C 396 nt1.45□□□□□ -2.18
LSM6Q06406 PAU20YOL161C 363 nt1.45□□□□□ -2.18
LSM6Q06406 GIP3YPL137C 3831 nt1.45□□□□□ -2.18
LSM6Q06406 APD1YBR151W 951 nt1.45□□□□□ -2.18
LSM6Q06406 MPS1YDL028C 2295 nt1.45□□□□□ -2.18
LSM6Q06406 HUL5YGL141W 2733 nt1.45□□□□□ -2.18
LSM6Q06406 UTP21YLR409C 2820 nt1.44□□□□□ -2.18
LSM6Q06406 SET2YJL168C 2202 nt1.44□□□□□ -2.18
LSM6Q06406 AGE1YDR524C 1449 nt1.44□□□□□ -2.18
LSM6Q06406 CDC60YPL160W 3273 nt1.44□□□□□ -2.18
LSM6Q06406 SEC31YDL195W 3822 nt1.44□□□□□ -2.18
LSM6Q06406 RAV2YDR202C 1056 nt1.44□□□□□ -2.18
LSM6Q06406 tW(CCA)G1tW(CCA)G1 72 nt1.44□□□□□ -2.18
LSM6Q06406 tW(CCA)G2tW(CCA)G2 72 nt1.44□□□□□ -2.18
LSM6Q06406 tW(CCA)JtW(CCA)J 72 nt1.44□□□□□ -2.18
LSM6Q06406 tW(CCA)KtW(CCA)K 72 nt1.44□□□□□ -2.18
LSM6Q06406 tW(CCA)MtW(CCA)M 72 nt1.44□□□□□ -2.18
LSM6Q06406 tW(CCA)PtW(CCA)P 72 nt1.44□□□□□ -2.18
LSM6Q06406 RPC17YJL011C 486 nt1.44□□□□□ -2.18
LSM6Q06406 UTP30YKR060W 825 nt1.44□□□□□ -2.18
LSM6Q06406 ECM5YMR176W 4236 nt1.44□□□□□ -2.18
LSM6Q06406 MYO2YOR326W 4725 nt1.44□□□□□ -2.18
LSM6Q06406 FRE8YLR047C 2061 nt1.44□□□□□ -2.18
LSM6Q06406 HOS4YIL112W 3252 nt1.43□□□□□ -2.18
LSM6Q06406 MIG2YGL209W 1149 nt1.43□□□□□ -2.18
LSM6Q06406 tT(UGU)HtT(UGU)H 72 nt1.43□□□□□ -2.18
LSM6Q06406 YKR051WYKR051W 1257 nt1.43□□□□□ -2.18
LSM6Q06406 EMC6YLL014W 327 nt1.43□□□□□ -2.18
LSM6Q06406 YAR075WYAR075W 474 nt1.43□□□□□ -2.18
LSM6Q06406 YBL028CYBL028C 321 nt1.43□□□□□ -2.18
LSM6Q06406 YNL035CYNL035C 1170 nt1.43□□□□□ -2.18
LSM6Q06406 FPR1YNL135C 345 nt1.43□□□□□ -2.18
LSM6Q06406 TPT1YOL102C 693 nt1.43□□□□□ -2.18
LSM6Q06406 MF(ALPHA)1YPL187W 498 nt1.43□□□□□ -2.18
LSM6Q06406 MET16YPR167C 786 nt1.43□□□□□ -2.18
LSM6Q06406 TIM12YBR091C 330 nt1.43□□□□□ -2.18
LSM6Q06406 RTP1YMR185W 2946 nt1.43□□□□□ -2.18
LSM6Q06406 PUT3YKL015W 2940 nt1.42□□□□□ -2.18
LSM6Q06406 GCN4YEL009C 846 nt1.42□□□□□ -2.18
LSM6Q06406 PMI40YER003C 1290 nt1.42□□□□□ -2.18
LSM6Q06406 YPS5YGL259W 498 nt1.42□□□□□ -2.18
LSM6Q06406 DOG1YHR044C 741 nt1.42□□□□□ -2.18
LSM6Q06406 MRPL6YHR147C 645 nt1.42□□□□□ -2.18
LSM6Q06406 YIL068W-AYIL068W-A 384 nt1.42□□□□□ -2.18
LSM6Q06406 CAB2YIL083C 1098 nt1.42□□□□□ -2.18
LSM6Q06406 SNX4YJL036W 1272 nt1.42□□□□□ -2.18
LSM6Q06406 COX14YML129C 213 nt1.42□□□□□ -2.18
LSM6Q06406 ATP22YDR350C 2055 nt1.42□□□□□ -2.18
LSM6Q06406 MYO4YAL029C 4416 nt1.41□□□□□ -2.18
LSM6Q06406 VPS15YBR097W 4365 nt1.41□□□□□ -2.18
LSM6Q06406 SSE1YPL106C 2082 nt1.41□□□□□ -2.18
LSM6Q06406 YEL075CYEL075C 369 nt1.41□□□□□ -2.18
LSM6Q06406 TWF1YGR080W 999 nt1.41□□□□□ -2.18
LSM6Q06406 VMA10YHR039C-A 345 nt1.41□□□□□ -2.18
LSM6Q06406 RSA1YPL193W 1146 nt1.41□□□□□ -2.18
LSM6Q06406 RNH70YGR276C 1662 nt1.41□□□□□ -2.18
LSM6Q06406 DFG16YOR030W 1860 nt1.41□□□□□ -2.18
LSM6Q06406 RGL1YPL066W 1440 nt1.4□□□□□ -2.18
LSM6Q06406 STN1YDR082W 1485 nt1.4□□□□□ -2.19
LSM6Q06406 YLR108CYLR108C 1458 nt1.4□□□□□ -2.19
LSM6Q06406 NOP19YGR251W 591 nt1.4□□□□□ -2.19
LSM6Q06406 YGR273CYGR273C 525 nt1.4□□□□□ -2.19
LSM6Q06406 CSE4YKL049C 690 nt1.4□□□□□ -2.19
LSM6Q06406 YLR154W-AYLR154W-A 186 nt1.4□□□□□ -2.19
LSM6Q06406 DSF2YBR007C 2211 nt1.4□□□□□ -2.19
LSM6Q06406 SEN54YPL083C 1404 nt1.4□□□□□ -2.19
LSM6Q06406 ALK2YBL009W 2031 nt1.39□□□□□ -2.19
LSM6Q06406 CBS2YDR197W 1170 nt1.39□□□□□ -2.19
LSM6Q06406 COX13YGL191W 390 nt1.39□□□□□ -2.19
LSM6Q06406 MRT4YKL009W 711 nt1.39□□□□□ -2.19
LSM6Q06406 VPS51YKR020W 495 nt1.39□□□□□ -2.19
LSM6Q06406 RPS17AYML024W 411 nt1.39□□□□□ -2.19
LSM6Q06406 YML094C-AYML094C-A 402 nt1.39□□□□□ -2.19
LSM6Q06406 YMR306C-AYMR306C-A 390 nt1.39□□□□□ -2.19
LSM6Q06406 YNL144W-AYNL144W-A 84 nt1.39□□□□□ -2.19
LSM6Q06406 UAF30YOR295W 687 nt1.39□□□□□ -2.19
LSM6Q06406 YPL035CYPL035C 348 nt1.39□□□□□ -2.19
LSM6Q06406 REG2YBR050C 1017 nt1.39□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 18.4 ms