Protein–RNA interactions for Protein: Q04673

SSL1, General transcription and DNA repair factor IIH subunit SSL1, yeastyeast

Predicted RBP Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL1Q04673 SKG6YHR149C 2205 nt4.07□□□□□ -1.76
SSL1Q04673 RNA14YMR061W 2034 nt4.07□□□□□ -1.76
SSL1Q04673 YKR078WYKR078W 1758 nt4.07□□□□□ -1.76
SSL1Q04673 NUG1YER006W 1563 nt4.07□□□□□ -1.76
SSL1Q04673 ALO1YML086C 1581 nt4.07□□□□□ -1.76
SSL1Q04673 YDR115WYDR115W 318 nt4.07□□□□□ -1.76
SSL1Q04673 RTS3YGR161C 792 nt4.07□□□□□ -1.76
SSL1Q04673 RPS4BYHR203C 786 nt4.07□□□□□ -1.76
SSL1Q04673 YIL175WYIL175W 318 nt4.07□□□□□ -1.76
SSL1Q04673 YIR020CYIR020C 303 nt4.07□□□□□ -1.76
SSL1Q04673 RPS4AYJR145C 786 nt4.07□□□□□ -1.76
SSL1Q04673 YAL068W-AYAL068W-A 255 nt4.07□□□□□ -1.76
SSL1Q04673 YLR428CYLR428C 345 nt4.07□□□□□ -1.76
SSL1Q04673 DER1YBR201W 636 nt4.07□□□□□ -1.76
SSL1Q04673 snR54snR54 86 nt4.07□□□□□ -1.76
SSL1Q04673 EPO1YMR124W 2832 nt4.07□□□□□ -1.76
SSL1Q04673 POL1YNL102W 4407 nt4.07□□□□□ -1.76
SSL1Q04673 MSK1YNL073W 1731 nt4.07□□□□□ -1.76
SSL1Q04673 FKH2YNL068C 2589 nt4.07□□□□□ -1.76
SSL1Q04673 STE24YJR117W 1362 nt4.06□□□□□ -1.76
SSL1Q04673 ISW2YOR304W 3363 nt4.06□□□□□ -1.76
SSL1Q04673 YCR045W-AYCR045W-A 351 nt4.06□□□□□ -1.76
SSL1Q04673 YDR246W-AYDR246W-A 201 nt4.06□□□□□ -1.76
SSL1Q04673 IDP2YLR174W 1239 nt4.06□□□□□ -1.76
SSL1Q04673 DDR48YMR173W 1293 nt4.06□□□□□ -1.76
SSL1Q04673 VAM10YOR068C 345 nt4.06□□□□□ -1.76
SSL1Q04673 MBA1YBR185C 837 nt4.06□□□□□ -1.76
SSL1Q04673 FAS2YPL231W 5664 nt4.06□□□□□ -1.76
SSL1Q04673 ULP1YPL020C 1866 nt4.06□□□□□ -1.76
SSL1Q04673 YOL153CYOL153C 1746 nt4.06□□□□□ -1.76
SSL1Q04673 YOL075CYOL075C 3885 nt4.05□□□□□ -1.76
SSL1Q04673 SEG1YMR086W 2883 nt4.05□□□□□ -1.76
SSL1Q04673 MCD4YKL165C 2760 nt4.05□□□□□ -1.76
SSL1Q04673 NOP6YDL213C 678 nt4.05□□□□□ -1.76
SSL1Q04673 ATG31YDR022C 591 nt4.05□□□□□ -1.76
SSL1Q04673 YER006C-AYER006C-A 318 nt4.05□□□□□ -1.76
SSL1Q04673 SPT2YER161C 1002 nt4.05□□□□□ -1.76
SSL1Q04673 YFL015CYFL015C 495 nt4.05□□□□□ -1.76
SSL1Q04673 YKL044WYKL044W 321 nt4.05□□□□□ -1.76
SSL1Q04673 AFT2YPL202C 1251 nt4.05□□□□□ -1.76
SSL1Q04673 OAF3YKR064W 2592 nt4.05□□□□□ -1.76
SSL1Q04673 SWC4YGR002C 1431 nt4.04□□□□□ -1.76
SSL1Q04673 SPC105YGL093W 2754 nt4.04□□□□□ -1.76
SSL1Q04673 HDA2YDR295C 2025 nt4.04□□□□□ -1.76
SSL1Q04673 BUD5YCR038C 1929 nt4.04□□□□□ -1.76
SSL1Q04673 YDL094CYDL094C 510 nt4.04□□□□□ -1.76
SSL1Q04673 RRP42YDL111C 798 nt4.04□□□□□ -1.76
SSL1Q04673 YHL034W-AYHL034W-A 462 nt4.04□□□□□ -1.76
SSL1Q04673 YHR125WYHR125W 306 nt4.04□□□□□ -1.76
SSL1Q04673 SEC22YLR268W 645 nt4.04□□□□□ -1.76
SSL1Q04673 YLR287CYLR287C 1068 nt4.04□□□□□ -1.76
SSL1Q04673 NGL1YOL042W 1092 nt4.04□□□□□ -1.76
SSL1Q04673 GRE2YOL151W 1029 nt4.04□□□□□ -1.76
SSL1Q04673 YOR053WYOR053W 342 nt4.04□□□□□ -1.76
SSL1Q04673 MUD2YKL074C 1584 nt4.04□□□□□ -1.76
SSL1Q04673 SLK19YOR195W 2466 nt4.04□□□□□ -1.76
SSL1Q04673 TRS85YDR108W 2097 nt4.04□□□□□ -1.76
SSL1Q04673 TGL3YMR313C 1929 nt4.03□□□□□ -1.76
SSL1Q04673 HAA1YPR008W 2085 nt4.03□□□□□ -1.76
SSL1Q04673 TMA17YDL110C 453 nt4.03□□□□□ -1.76
SSL1Q04673 MCR1YKL150W 909 nt4.03□□□□□ -1.76
SSL1Q04673 YLR101CYLR101C 396 nt4.03□□□□□ -1.76
SSL1Q04673 RIM9YMR063W 720 nt4.03□□□□□ -1.76
SSL1Q04673 SIL1YOL031C 1266 nt4.03□□□□□ -1.76
SSL1Q04673 AIM4YBR194W 372 nt4.03□□□□□ -1.76
SSL1Q04673 TAF7YMR227C 1773 nt4.03□□□□□ -1.76
SSL1Q04673 ADY4YLR227C 1482 nt4.03□□□□□ -1.76
SSL1Q04673 PSP1YDR505C 2526 nt4.02□□□□□ -1.77
SSL1Q04673 PUB1YNL016W 1362 nt4.02□□□□□ -1.77
SSL1Q04673 SIN4YNL236W 2925 nt4.02□□□□□ -1.77
SSL1Q04673 YNL284C-AYNL284C-A 1323 nt4.02□□□□□ -1.77
SSL1Q04673 DIP2YLR129W 2832 nt4.02□□□□□ -1.77
SSL1Q04673 MDM36YPR083W 1740 nt4.02□□□□□ -1.77
SSL1Q04673 YDL228CYDL228C 642 nt4.02□□□□□ -1.77
SSL1Q04673 YER046W-AYER046W-A 330 nt4.02□□□□□ -1.77
SSL1Q04673 SOL4YGR248W 768 nt4.02□□□□□ -1.77
SSL1Q04673 ENT3YJR125C 1227 nt4.02□□□□□ -1.77
SSL1Q04673 AIM29YKR074W 468 nt4.02□□□□□ -1.77
SSL1Q04673 DAD2YKR083C 402 nt4.02□□□□□ -1.77
SSL1Q04673 NNT1YLR285W 786 nt4.02□□□□□ -1.77
SSL1Q04673 YBL039W-BYBL039W-B 180 nt4.02□□□□□ -1.77
SSL1Q04673 YPR197CYPR197C 564 nt4.02□□□□□ -1.77
SSL1Q04673 UPC2YDR213W 2742 nt4.02□□□□□ -1.77
SSL1Q04673 RIA1YNL163C 3333 nt4.02□□□□□ -1.77
SSL1Q04673 PAM1YDR251W 2493 nt4.01□□□□□ -1.77
SSL1Q04673 UBP12YJL197W 3765 nt4.01□□□□□ -1.77
SSL1Q04673 YDR262WYDR262W 819 nt4.01□□□□□ -1.77
SSL1Q04673 OTU1YFL044C 906 nt4.01□□□□□ -1.77
SSL1Q04673 BIG1YHR101C 1008 nt4.01□□□□□ -1.77
SSL1Q04673 PAM18YLR008C 507 nt4.01□□□□□ -1.77
SSL1Q04673 YKE2YLR200W 345 nt4.01□□□□□ -1.77
SSL1Q04673 YML108WYML108W 318 nt4.01□□□□□ -1.77
SSL1Q04673 ARG80YMR042W 534 nt4.01□□□□□ -1.77
SSL1Q04673 RIO2YNL207W 1278 nt4.01□□□□□ -1.77
SSL1Q04673 YBR201C-AYBR201C-A 204 nt4.01□□□□□ -1.77
SSL1Q04673 CIT1YNR001C 1440 nt4.01□□□□□ -1.77
SSL1Q04673 DAP2YHR028C 2457 nt4.01□□□□□ -1.77
SSL1Q04673 SHE4YOR035C 2370 nt4□□□□□ -1.77
SSL1Q04673 DAL5YJR152W 1632 nt4□□□□□ -1.77
SSL1Q04673 KIP3YGL216W 2418 nt4□□□□□ -1.77
Retrieved 100 of 7,029 protein–RNA pairs in 16.3 ms