Protein–RNA interactions for Protein: Q04487

SHH3, Mitochondrial inner membrane protein SHH3, yeastyeast

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHH3Q04487 IRC8YJL051W 2469 nt1.99□□□□□ -2.09
SHH3Q04487 RPN4YDL020C 1596 nt1.99□□□□□ -2.09
SHH3Q04487 AI2Q0055 2565 nt1.99□□□□□ -2.09
SHH3Q04487 RPL35BYDL136W 363 nt1.99□□□□□ -2.09
SHH3Q04487 ECM11YDR446W 909 nt1.99□□□□□ -2.09
SHH3Q04487 YDR535CYDR535C 501 nt1.99□□□□□ -2.09
SHH3Q04487 YGL159WYGL159W 1113 nt1.99□□□□□ -2.09
SHH3Q04487 ADH4YGL256W 1149 nt1.99□□□□□ -2.09
SHH3Q04487 RPS25AYGR027C 327 nt1.99□□□□□ -2.09
SHH3Q04487 MPC3YGR243W 441 nt1.99□□□□□ -2.09
SHH3Q04487 OMA1YKR087C 1038 nt1.99□□□□□ -2.09
SHH3Q04487 YNL162W-AYNL162W-A 219 nt1.99□□□□□ -2.09
SHH3Q04487 HSP10YOR020C 321 nt1.99□□□□□ -2.09
SHH3Q04487 YOR203WYOR203W 354 nt1.99□□□□□ -2.09
SHH3Q04487 SRL1YOR247W 633 nt1.99□□□□□ -2.09
SHH3Q04487 GPI2YPL076W 843 nt1.99□□□□□ -2.09
SHH3Q04487 RRD2YPL152W 1077 nt1.99□□□□□ -2.09
SHH3Q04487 LTP1YPR073C 486 nt1.99□□□□□ -2.09
SHH3Q04487 RSE1YML049C 4086 nt1.99□□□□□ -2.09
SHH3Q04487 PTP3YER075C 2787 nt1.99□□□□□ -2.09
SHH3Q04487 STN1YDR082W 1485 nt1.99□□□□□ -2.09
SHH3Q04487 BOI1YBL085W 2943 nt1.98□□□□□ -2.09
SHH3Q04487 WHI3YNL197C 1986 nt1.98□□□□□ -2.09
SHH3Q04487 YDL026WYDL026W 312 nt1.98□□□□□ -2.09
SHH3Q04487 TCA17YEL048C 459 nt1.98□□□□□ -2.09
SHH3Q04487 PRP18YGR006W 756 nt1.98□□□□□ -2.09
SHH3Q04487 YGR168CYGR168C 1131 nt1.98□□□□□ -2.09
SHH3Q04487 YHR213WYHR213W 597 nt1.98□□□□□ -2.09
SHH3Q04487 PCL7YIL050W 858 nt1.98□□□□□ -2.09
SHH3Q04487 CDC123YLR215C 1083 nt1.98□□□□□ -2.09
SHH3Q04487 YAR062WYAR062W 597 nt1.98□□□□□ -2.09
SHH3Q04487 RPL25YOL127W 429 nt1.98□□□□□ -2.09
SHH3Q04487 YOR050CYOR050C 348 nt1.98□□□□□ -2.09
SHH3Q04487 RPB8YOR224C 441 nt1.98□□□□□ -2.09
SHH3Q04487 YOR283WYOR283W 693 nt1.98□□□□□ -2.09
SHH3Q04487 YOR387CYOR387C 621 nt1.98□□□□□ -2.09
SHH3Q04487 FRE8YLR047C 2061 nt1.98□□□□□ -2.09
SHH3Q04487 APC5YOR249C 2058 nt1.98□□□□□ -2.09
SHH3Q04487 IRA2YOL081W 9240 nt1.98□□□□□ -2.09
SHH3Q04487 STE11YLR362W 2154 nt1.98□□□□□ -2.09
SHH3Q04487 BNI1YNL271C 5862 nt1.97□□□□□ -2.09
SHH3Q04487 YBT1YLL048C 4986 nt1.97□□□□□ -2.09
SHH3Q04487 VPS64YDR200C 1815 nt1.97□□□□□ -2.09
SHH3Q04487 MED2YDL005C 1296 nt1.97□□□□□ -2.09
SHH3Q04487 PET100YDR079W 336 nt1.97□□□□□ -2.09
SHH3Q04487 HMO1YDR174W 741 nt1.97□□□□□ -2.09
SHH3Q04487 YFR010W-AYFR010W-A 189 nt1.97□□□□□ -2.09
SHH3Q04487 PEX18YHR160C 852 nt1.97□□□□□ -2.09
SHH3Q04487 TFA2YKR062W 987 nt1.97□□□□□ -2.09
SHH3Q04487 SDO1YLR022C 753 nt1.97□□□□□ -2.09
SHH3Q04487 NNT1YLR285W 786 nt1.97□□□□□ -2.09
SHH3Q04487 BLS1YLR408C 369 nt1.97□□□□□ -2.09
SHH3Q04487 HMT1YBR034C 1047 nt1.97□□□□□ -2.09
SHH3Q04487 YBR259WYBR259W 2067 nt1.97□□□□□ -2.09
SHH3Q04487 AVT5YBL089W 1380 nt1.97□□□□□ -2.09
SHH3Q04487 VPS13YLL040C 9435 nt1.96□□□□□ -2.1
SHH3Q04487 HBT1YDL223C 3141 nt1.96□□□□□ -2.1
SHH3Q04487 PDR11YIL013C 4236 nt1.96□□□□□ -2.1
SHH3Q04487 NOP14YDL148C 2433 nt1.96□□□□□ -2.1
SHH3Q04487 TOR1YJR066W 7413 nt1.96□□□□□ -2.1
SHH3Q04487 YDR193WYDR193W 399 nt1.96□□□□□ -2.1
SHH3Q04487 YDR290WYDR290W 330 nt1.96□□□□□ -2.1
SHH3Q04487 COBQ0105 1158 nt1.96□□□□□ -2.1
SHH3Q04487 UPF3YGR072W 1164 nt1.96□□□□□ -2.1
SHH3Q04487 YHR032W-AYHR032W-A 180 nt1.96□□□□□ -2.1
SHH3Q04487 RGI2YIL057C 495 nt1.96□□□□□ -2.1
SHH3Q04487 SKG1YKR100C 1068 nt1.96□□□□□ -2.1
SHH3Q04487 PAU23YLR037C 375 nt1.96□□□□□ -2.1
SHH3Q04487 YOL114CYOL114C 609 nt1.96□□□□□ -2.1
SHH3Q04487 PRM4YPL156C 855 nt1.96□□□□□ -2.1
SHH3Q04487 AIM4YBR194W 372 nt1.96□□□□□ -2.1
SHH3Q04487 DNF1YER166W 4716 nt1.96□□□□□ -2.1
SHH3Q04487 RLI1YDR091C 1827 nt1.96□□□□□ -2.1
SHH3Q04487 DUG2YBR281C 2637 nt1.95□□□□□ -2.1
SHH3Q04487 YCR064CYCR064C 411 nt1.95□□□□□ -2.1
SHH3Q04487 EDC1YGL222C 528 nt1.95□□□□□ -2.1
SHH3Q04487 MSA2YKR077W 1092 nt1.95□□□□□ -2.1
SHH3Q04487 RPS1AYLR441C 768 nt1.95□□□□□ -2.1
SHH3Q04487 PRM6YML047C 1059 nt1.95□□□□□ -2.1
SHH3Q04487 TEX1YNL253W 1269 nt1.95□□□□□ -2.1
SHH3Q04487 TPT1YOL102C 693 nt1.95□□□□□ -2.1
SHH3Q04487 FIG1YBR040W 897 nt1.95□□□□□ -2.1
SHH3Q04487 YCL001W-AYCL001W-A 462 nt1.95□□□□□ -2.1
SHH3Q04487 GRX1YCL035C 333 nt1.95□□□□□ -2.1
SHH3Q04487 ELG1YOR144C 2376 nt1.95□□□□□ -2.1
SHH3Q04487 TRS130YMR218C 3309 nt1.95□□□□□ -2.1
SHH3Q04487 VHR1YIL056W 1923 nt1.95□□□□□ -2.1
SHH3Q04487 RRP14YKL082C 1305 nt1.94□□□□□ -2.1
SHH3Q04487 YNL011CYNL011C 1335 nt1.94□□□□□ -2.1
SHH3Q04487 MPS2YGL075C 1164 nt1.94□□□□□ -2.1
SHH3Q04487 ERG25YGR060W 930 nt1.94□□□□□ -2.1
SHH3Q04487 tW(CCA)G1tW(CCA)G1 72 nt1.94□□□□□ -2.1
SHH3Q04487 tW(CCA)G2tW(CCA)G2 72 nt1.94□□□□□ -2.1
SHH3Q04487 tW(CCA)JtW(CCA)J 72 nt1.94□□□□□ -2.1
SHH3Q04487 tW(CCA)KtW(CCA)K 72 nt1.94□□□□□ -2.1
SHH3Q04487 tW(CCA)MtW(CCA)M 72 nt1.94□□□□□ -2.1
SHH3Q04487 tW(CCA)PtW(CCA)P 72 nt1.94□□□□□ -2.1
SHH3Q04487 YIL156W-BYIL156W-B 222 nt1.94□□□□□ -2.1
SHH3Q04487 YKL070WYKL070W 510 nt1.94□□□□□ -2.1
SHH3Q04487 RPS29AYLR388W 171 nt1.94□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 32.4 ms