Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CKS1BP61024 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC14.57□□□□□ -0.08
CKS1BP61024 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC14.57□□□□□ -0.08
CKS1BP61024 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKS1BP61024 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CKS1BP61024 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKS1BP61024 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKS1BP61024 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC14.56□□□□□ -0.08
CKS1BP61024 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CKS1BP61024 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKS1BP61024 GUK1-208ENST00000366728 842 ntTSL 2 BASIC14.56□□□□□ -0.08
CKS1BP61024 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC14.56□□□□□ -0.08
CKS1BP61024 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC14.56□□□□□ -0.08
CKS1BP61024 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC14.56□□□□□ -0.08
CKS1BP61024 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKS1BP61024 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKS1BP61024 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKS1BP61024 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKS1BP61024 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKS1BP61024 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CKS1BP61024 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKS1BP61024 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKS1BP61024 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CKS1BP61024 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKS1BP61024 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC14.55□□□□□ -0.08
CKS1BP61024 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKS1BP61024 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CKS1BP61024 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKS1BP61024 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CKS1BP61024 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC14.55□□□□□ -0.08
CKS1BP61024 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKS1BP61024 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC14.55□□□□□ -0.08
CKS1BP61024 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC14.55□□□□□ -0.08
CKS1BP61024 TK2-216ENST00000564917 1156 ntTSL 3 BASIC14.55□□□□□ -0.08
CKS1BP61024 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC14.55□□□□□ -0.08
CKS1BP61024 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC14.55□□□□□ -0.08
CKS1BP61024 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CKS1BP61024 MIR6722-201ENST00000617286 78 ntBASIC14.55□□□□□ -0.08
CKS1BP61024 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CKS1BP61024 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CKS1BP61024 BCL2-203ENST00000589955 5011 ntBASIC14.55□□□□□ -0.08
CKS1BP61024 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKS1BP61024 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKS1BP61024 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC14.55□□□□□ -0.08
CKS1BP61024 KRT8P33-201ENST00000508125 1423 ntBASIC14.55□□□□□ -0.08
CKS1BP61024 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
CKS1BP61024 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CKS1BP61024 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CKS1BP61024 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKS1BP61024 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CKS1BP61024 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKS1BP61024 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKS1BP61024 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC14.54□□□□□ -0.08
CKS1BP61024 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC14.54□□□□□ -0.08
CKS1BP61024 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKS1BP61024 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKS1BP61024 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC14.54□□□□□ -0.08
CKS1BP61024 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKS1BP61024 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKS1BP61024 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKS1BP61024 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CKS1BP61024 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC14.54□□□□□ -0.08
CKS1BP61024 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC14.54□□□□□ -0.08
CKS1BP61024 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CKS1BP61024 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKS1BP61024 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKS1BP61024 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CKS1BP61024 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKS1BP61024 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CKS1BP61024 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKS1BP61024 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC14.54□□□□□ -0.08
CKS1BP61024 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC14.54□□□□□ -0.08
CKS1BP61024 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14.54□□□□□ -0.08
CKS1BP61024 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKS1BP61024 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CKS1BP61024 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC14.54□□□□□ -0.08
CKS1BP61024 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CKS1BP61024 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKS1BP61024 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
CKS1BP61024 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CKS1BP61024 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKS1BP61024 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CKS1BP61024 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.53□□□□□ -0.08
CKS1BP61024 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKS1BP61024 AC011270.2-201ENST00000624293 2550 ntBASIC14.53□□□□□ -0.08
CKS1BP61024 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC14.53□□□□□ -0.08
CKS1BP61024 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
CKS1BP61024 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CKS1BP61024 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CKS1BP61024 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CKS1BP61024 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKS1BP61024 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC14.53□□□□□ -0.08
CKS1BP61024 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKS1BP61024 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKS1BP61024 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC14.53□□□□□ -0.08
CKS1BP61024 CLTA-210ENST00000540080 989 ntTSL 2 BASIC14.53□□□□□ -0.08
CKS1BP61024 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC14.53□□□□□ -0.08
CKS1BP61024 AC137630.3-201ENST00000607245 391 ntBASIC14.53□□□□□ -0.08
CKS1BP61024 AC012354.3-201ENST00000623734 483 ntBASIC14.53□□□□□ -0.08
CKS1BP61024 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms