Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.07■□□□□ 0.8
VSX2P58304 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.07■□□□□ 0.8
VSX2P58304 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
VSX2P58304 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VSX2P58304 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VSX2P58304 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VSX2P58304 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.07■□□□□ 0.8
VSX2P58304 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.07■□□□□ 0.8
VSX2P58304 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VSX2P58304 AC073111.5-205ENST00000641717 521 ntBASIC20.07■□□□□ 0.8
VSX2P58304 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VSX2P58304 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VSX2P58304 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
VSX2P58304 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VSX2P58304 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.06■□□□□ 0.8
VSX2P58304 FBXW4P1-201ENST00000426721 2239 ntBASIC20.06■□□□□ 0.8
VSX2P58304 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VSX2P58304 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VSX2P58304 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VSX2P58304 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
VSX2P58304 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.06■□□□□ 0.8
VSX2P58304 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VSX2P58304 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.06■□□□□ 0.8
VSX2P58304 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.06■□□□□ 0.8
VSX2P58304 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.06■□□□□ 0.8
VSX2P58304 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VSX2P58304 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.06■□□□□ 0.8
VSX2P58304 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.06■□□□□ 0.8
VSX2P58304 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
VSX2P58304 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VSX2P58304 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
VSX2P58304 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VSX2P58304 CDCA4P2-201ENST00000441182 718 ntBASIC20.05■□□□□ 0.8
VSX2P58304 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VSX2P58304 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VSX2P58304 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.05■□□□□ 0.8
VSX2P58304 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
VSX2P58304 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VSX2P58304 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VSX2P58304 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VSX2P58304 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VSX2P58304 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
VSX2P58304 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.04■□□□□ 0.8
VSX2P58304 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
VSX2P58304 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
VSX2P58304 SLC7A5P1-201ENST00000568957 537 ntBASIC20.04■□□□□ 0.8
VSX2P58304 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.04■□□□□ 0.8
VSX2P58304 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
VSX2P58304 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.04■□□□□ 0.8
VSX2P58304 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.04■□□□□ 0.8
VSX2P58304 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VSX2P58304 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VSX2P58304 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
VSX2P58304 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VSX2P58304 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VSX2P58304 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.03■□□□□ 0.8
VSX2P58304 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
VSX2P58304 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VSX2P58304 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VSX2P58304 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
VSX2P58304 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VSX2P58304 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.03■□□□□ 0.8
VSX2P58304 DUX4L16-201ENST00000555130 1264 ntBASIC20.03■□□□□ 0.8
VSX2P58304 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
VSX2P58304 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VSX2P58304 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.03■□□□□ 0.8
VSX2P58304 AC010536.3-201ENST00000620306 533 ntBASIC20.03■□□□□ 0.8
VSX2P58304 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VSX2P58304 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VSX2P58304 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VSX2P58304 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VSX2P58304 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.03■□□□□ 0.8
VSX2P58304 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
VSX2P58304 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
VSX2P58304 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.02■□□□□ 0.8
VSX2P58304 KRT16P2-201ENST00000414673 1423 ntBASIC20.02■□□□□ 0.8
VSX2P58304 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.02■□□□□ 0.8
VSX2P58304 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VSX2P58304 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
VSX2P58304 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.02■□□□□ 0.8
VSX2P58304 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VSX2P58304 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VSX2P58304 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
VSX2P58304 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.02■□□□□ 0.8
VSX2P58304 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.02■□□□□ 0.8
VSX2P58304 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.02■□□□□ 0.8
VSX2P58304 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.02■□□□□ 0.8
VSX2P58304 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.02■□□□□ 0.8
VSX2P58304 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.02■□□□□ 0.8
VSX2P58304 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.02■□□□□ 0.8
VSX2P58304 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.02■□□□□ 0.8
VSX2P58304 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.02■□□□□ 0.8
VSX2P58304 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.02■□□□□ 0.8
VSX2P58304 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
VSX2P58304 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VSX2P58304 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.02■□□□□ 0.8
VSX2P58304 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
VSX2P58304 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VSX2P58304 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VSX2P58304 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms