Protein–RNA interactions for Protein: P53867

ATG4, Cysteine protease ATG4, yeastyeast

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG4P53867 tQ(UUG)D2tQ(UUG)D2 72 nt3.68□□□□□ -1.82
ATG4P53867 tQ(UUG)D3tQ(UUG)D3 72 nt3.68□□□□□ -1.82
ATG4P53867 tQ(UUG)E1tQ(UUG)E1 72 nt3.68□□□□□ -1.82
ATG4P53867 tQ(UUG)HtQ(UUG)H 72 nt3.68□□□□□ -1.82
ATG4P53867 tQ(UUG)LtQ(UUG)L 72 nt3.68□□□□□ -1.82
ATG4P53867 YAP3YHL009C 993 nt3.68□□□□□ -1.82
ATG4P53867 DAD2YKR083C 402 nt3.68□□□□□ -1.82
ATG4P53867 AFT2YPL202C 1251 nt3.68□□□□□ -1.82
ATG4P53867 SEC2YNL272C 2280 nt3.68□□□□□ -1.82
ATG4P53867 YNL284C-AYNL284C-A 1323 nt3.68□□□□□ -1.82
ATG4P53867 BRE4YDL231C 3378 nt3.68□□□□□ -1.82
ATG4P53867 HNT1YDL125C 477 nt3.67□□□□□ -1.82
ATG4P53867 RPS18AYDR450W 441 nt3.67□□□□□ -1.82
ATG4P53867 BUD13YGL174W 801 nt3.67□□□□□ -1.82
ATG4P53867 VMA10YHR039C-A 345 nt3.67□□□□□ -1.82
ATG4P53867 SDP1YIL113W 630 nt3.67□□□□□ -1.82
ATG4P53867 RDN5-1RDN5-1 121 nt3.67□□□□□ -1.82
ATG4P53867 AFB1YLR040C 675 nt3.67□□□□□ -1.82
ATG4P53867 RDN5-6RDN5-6 121 nt3.67□□□□□ -1.82
ATG4P53867 YBR141W-AYBR141W-A 96 nt3.67□□□□□ -1.82
ATG4P53867 ISW2YOR304W 3363 nt3.67□□□□□ -1.82
ATG4P53867 MCD4YKL165C 2760 nt3.67□□□□□ -1.82
ATG4P53867 RAD54YGL163C 2697 nt3.67□□□□□ -1.82
ATG4P53867 DAL5YJR152W 1632 nt3.66□□□□□ -1.82
ATG4P53867 YDR262WYDR262W 819 nt3.66□□□□□ -1.82
ATG4P53867 YHI9YHR029C 885 nt3.66□□□□□ -1.82
ATG4P53867 DPH1YIL103W 1278 nt3.66□□□□□ -1.82
ATG4P53867 EMC2YJR088C 879 nt3.66□□□□□ -1.82
ATG4P53867 YAL068W-AYAL068W-A 255 nt3.66□□□□□ -1.82
ATG4P53867 YLR101CYLR101C 396 nt3.66□□□□□ -1.82
ATG4P53867 NNT1YLR285W 786 nt3.66□□□□□ -1.82
ATG4P53867 YLR287CYLR287C 1068 nt3.66□□□□□ -1.82
ATG4P53867 RAD33YML011C 534 nt3.66□□□□□ -1.82
ATG4P53867 YOR199WYOR199W 330 nt3.66□□□□□ -1.82
ATG4P53867 YOR331CYOR331C 558 nt3.66□□□□□ -1.82
ATG4P53867 AIM4YBR194W 372 nt3.66□□□□□ -1.82
ATG4P53867 KIP3YGL216W 2418 nt3.66□□□□□ -1.82
ATG4P53867 ULP1YPL020C 1866 nt3.66□□□□□ -1.82
ATG4P53867 GRS2YPR081C 1857 nt3.66□□□□□ -1.82
ATG4P53867 RNA14YMR061W 2034 nt3.66□□□□□ -1.82
ATG4P53867 NCS2YNL119W 1482 nt3.66□□□□□ -1.82
ATG4P53867 EXO5YBR163W 1758 nt3.66□□□□□ -1.82
ATG4P53867 BUD5YCR038C 1929 nt3.66□□□□□ -1.82
ATG4P53867 SEG1YMR086W 2883 nt3.65□□□□□ -1.82
ATG4P53867 NUP2YLR335W 2163 nt3.65□□□□□ -1.82
ATG4P53867 AIM21YIR003W 2040 nt3.65□□□□□ -1.82
ATG4P53867 VPS45YGL095C 1734 nt3.65□□□□□ -1.82
ATG4P53867 MNT4YNR059W 1743 nt3.65□□□□□ -1.82
ATG4P53867 YML096WYML096W 1578 nt3.65□□□□□ -1.82
ATG4P53867 YGR117CYGR117C 1431 nt3.65□□□□□ -1.83
ATG4P53867 CIT1YNR001C 1440 nt3.65□□□□□ -1.83
ATG4P53867 snR59snR59 78 nt3.65□□□□□ -1.83
ATG4P53867 YER135CYER135C 393 nt3.65□□□□□ -1.83
ATG4P53867 YAL026C-AYAL026C-A 438 nt3.65□□□□□ -1.83
ATG4P53867 YNL089CYNL089C 477 nt3.65□□□□□ -1.83
ATG4P53867 YPL185WYPL185W 396 nt3.65□□□□□ -1.83
ATG4P53867 YSY6YBR162W-A 198 nt3.65□□□□□ -1.83
ATG4P53867 FRM2YCL026C-A 582 nt3.65□□□□□ -1.83
ATG4P53867 UTP25YIL091C 2166 nt3.65□□□□□ -1.83
ATG4P53867 PPN1YDR452W 2025 nt3.65□□□□□ -1.83
ATG4P53867 YDL199CYDL199C 2064 nt3.64□□□□□ -1.83
ATG4P53867 DAS1YJL149W 1992 nt3.64□□□□□ -1.83
ATG4P53867 SWF1YDR126W 1011 nt3.64□□□□□ -1.83
ATG4P53867 CPR5YDR304C 678 nt3.64□□□□□ -1.83
ATG4P53867 YER006C-AYER006C-A 318 nt3.64□□□□□ -1.83
ATG4P53867 YER068C-AYER068C-A 432 nt3.64□□□□□ -1.83
ATG4P53867 SEC53YFL045C 765 nt3.64□□□□□ -1.83
ATG4P53867 YGL108CYGL108C 423 nt3.64□□□□□ -1.83
ATG4P53867 YIL021C-AYIL021C-A 270 nt3.64□□□□□ -1.83
ATG4P53867 YLR224WYLR224W 1110 nt3.64□□□□□ -1.83
ATG4P53867 PDP3YLR455W 915 nt3.64□□□□□ -1.83
ATG4P53867 VAM10YOR068C 345 nt3.64□□□□□ -1.83
ATG4P53867 RPC40YPR110C 1008 nt3.64□□□□□ -1.83
ATG4P53867 MET4YNL103W 2019 nt3.64□□□□□ -1.83
ATG4P53867 YOL075CYOL075C 3885 nt3.64□□□□□ -1.83
ATG4P53867 UPC2YDR213W 2742 nt3.64□□□□□ -1.83
ATG4P53867 HSP30YCR021C 999 nt3.63□□□□□ -1.83
ATG4P53867 OTU1YFL044C 906 nt3.63□□□□□ -1.83
ATG4P53867 ENT3YJR125C 1227 nt3.63□□□□□ -1.83
ATG4P53867 TDA8YAL064C-A 381 nt3.63□□□□□ -1.83
ATG4P53867 CMC2YBL059C-A 330 nt3.63□□□□□ -1.83
ATG4P53867 snR54snR54 86 nt3.63□□□□□ -1.83
ATG4P53867 TRK1YJL129C 3708 nt3.62□□□□□ -1.83
ATG4P53867 PEP5YMR231W 3090 nt3.62□□□□□ -1.83
ATG4P53867 SWC4YGR002C 1431 nt3.62□□□□□ -1.83
ATG4P53867 AHC2YCR082W 387 nt3.62□□□□□ -1.83
ATG4P53867 snR68snR68 136 nt3.62□□□□□ -1.83
ATG4P53867 YHR032C-AYHR032C-A 120 nt3.62□□□□□ -1.83
ATG4P53867 PCL5YHR071W 690 nt3.62□□□□□ -1.83
ATG4P53867 YML108WYML108W 318 nt3.62□□□□□ -1.83
ATG4P53867 YML116W-AYML116W-A 303 nt3.62□□□□□ -1.83
ATG4P53867 HUB1YNR032C-A 222 nt3.62□□□□□ -1.83
ATG4P53867 YOR053WYOR053W 342 nt3.62□□□□□ -1.83
ATG4P53867 YBR076C-AYBR076C-A 267 nt3.62□□□□□ -1.83
ATG4P53867 YPR197CYPR197C 564 nt3.62□□□□□ -1.83
ATG4P53867 YBR285WYBR285W 435 nt3.62□□□□□ -1.83
ATG4P53867 NAT1YDL040C 2565 nt3.62□□□□□ -1.83
ATG4P53867 SHE4YOR035C 2370 nt3.62□□□□□ -1.83
ATG4P53867 SLK19YOR195W 2466 nt3.62□□□□□ -1.83
ATG4P53867 PSP1YDR505C 2526 nt3.62□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 37.9 ms