Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.91■□□□□ 0.94
RXRGP48443 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.9■□□□□ 0.94
RXRGP48443 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.9■□□□□ 0.94
RXRGP48443 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RXRGP48443 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.9■□□□□ 0.94
RXRGP48443 AP006587.3-201ENST00000525742 1516 ntBASIC20.9■□□□□ 0.94
RXRGP48443 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RXRGP48443 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.9■□□□□ 0.94
RXRGP48443 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RXRGP48443 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RXRGP48443 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.9■□□□□ 0.94
RXRGP48443 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RXRGP48443 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RXRGP48443 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RXRGP48443 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.9■□□□□ 0.94
RXRGP48443 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RXRGP48443 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RXRGP48443 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RXRGP48443 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RXRGP48443 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RXRGP48443 AC068338.2-201ENST00000563278 1430 ntBASIC20.89■□□□□ 0.94
RXRGP48443 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RXRGP48443 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.89■□□□□ 0.93
RXRGP48443 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.89■□□□□ 0.93
RXRGP48443 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RXRGP48443 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.89■□□□□ 0.93
RXRGP48443 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.88■□□□□ 0.93
RXRGP48443 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RXRGP48443 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RXRGP48443 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RXRGP48443 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RXRGP48443 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RXRGP48443 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RXRGP48443 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RXRGP48443 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RXRGP48443 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RXRGP48443 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RXRGP48443 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.88■□□□□ 0.93
RXRGP48443 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.88■□□□□ 0.93
RXRGP48443 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RXRGP48443 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RXRGP48443 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RXRGP48443 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
RXRGP48443 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RXRGP48443 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RXRGP48443 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RXRGP48443 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
RXRGP48443 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RXRGP48443 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.87■□□□□ 0.93
RXRGP48443 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.87■□□□□ 0.93
RXRGP48443 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RXRGP48443 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RXRGP48443 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.87■□□□□ 0.93
RXRGP48443 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RXRGP48443 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.87■□□□□ 0.93
RXRGP48443 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.87■□□□□ 0.93
RXRGP48443 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.87■□□□□ 0.93
RXRGP48443 MIR4758-201ENST00000577688 71 ntBASIC20.87■□□□□ 0.93
RXRGP48443 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
RXRGP48443 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RXRGP48443 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RXRGP48443 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RXRGP48443 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RXRGP48443 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RXRGP48443 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RXRGP48443 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RXRGP48443 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RXRGP48443 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RXRGP48443 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
RXRGP48443 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RXRGP48443 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RXRGP48443 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.86■□□□□ 0.93
RXRGP48443 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.86■□□□□ 0.93
RXRGP48443 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RXRGP48443 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RXRGP48443 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RXRGP48443 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
RXRGP48443 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.86■□□□□ 0.93
RXRGP48443 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.86■□□□□ 0.93
RXRGP48443 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RXRGP48443 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RXRGP48443 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RXRGP48443 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
RXRGP48443 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RXRGP48443 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RXRGP48443 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RXRGP48443 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RXRGP48443 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.85■□□□□ 0.93
RXRGP48443 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RXRGP48443 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.85■□□□□ 0.93
RXRGP48443 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.85■□□□□ 0.93
RXRGP48443 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.85■□□□□ 0.93
RXRGP48443 OR10C1-204ENST00000622521 1039 ntBASIC20.85■□□□□ 0.93
RXRGP48443 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
RXRGP48443 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.85■□□□□ 0.93
RXRGP48443 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
RXRGP48443 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RXRGP48443 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RXRGP48443 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RXRGP48443 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms