Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFC3P40938 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RFC3P40938 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.17■□□□□ 0.66
RFC3P40938 GUSBP6-202ENST00000438529 1198 ntBASIC19.17■□□□□ 0.66
RFC3P40938 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.17■□□□□ 0.66
RFC3P40938 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.17■□□□□ 0.66
RFC3P40938 AL121603.2-201ENST00000557373 2117 ntBASIC19.17■□□□□ 0.66
RFC3P40938 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
RFC3P40938 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.17■□□□□ 0.66
RFC3P40938 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RFC3P40938 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.17■□□□□ 0.66
RFC3P40938 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFC3P40938 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.17■□□□□ 0.66
RFC3P40938 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RFC3P40938 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RFC3P40938 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFC3P40938 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
RFC3P40938 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RFC3P40938 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.16■□□□□ 0.66
RFC3P40938 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RFC3P40938 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RFC3P40938 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.16■□□□□ 0.66
RFC3P40938 SLC29A4P1-201ENST00000398760 971 ntBASIC19.16■□□□□ 0.66
RFC3P40938 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.16■□□□□ 0.66
RFC3P40938 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
RFC3P40938 AF201337.1-201ENST00000520239 748 ntBASIC19.16■□□□□ 0.66
RFC3P40938 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.16■□□□□ 0.66
RFC3P40938 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.16■□□□□ 0.66
RFC3P40938 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RFC3P40938 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFC3P40938 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RFC3P40938 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFC3P40938 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.16■□□□□ 0.66
RFC3P40938 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RFC3P40938 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.16■□□□□ 0.66
RFC3P40938 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFC3P40938 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFC3P40938 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFC3P40938 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
RFC3P40938 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
RFC3P40938 CYP2T1P-201ENST00000432607 1285 ntBASIC19.15■□□□□ 0.66
RFC3P40938 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.15■□□□□ 0.66
RFC3P40938 SLC7A5P1-201ENST00000568957 537 ntBASIC19.15■□□□□ 0.66
RFC3P40938 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFC3P40938 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.15■□□□□ 0.66
RFC3P40938 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFC3P40938 AC068338.2-201ENST00000563278 1430 ntBASIC19.15■□□□□ 0.66
RFC3P40938 AC233723.2-201ENST00000623798 2106 ntBASIC19.15■□□□□ 0.66
RFC3P40938 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.15■□□□□ 0.66
RFC3P40938 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RFC3P40938 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.14■□□□□ 0.65
RFC3P40938 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RFC3P40938 POU5F1P4-201ENST00000413175 1085 ntBASIC19.14■□□□□ 0.65
RFC3P40938 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFC3P40938 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
RFC3P40938 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.14■□□□□ 0.65
RFC3P40938 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.14■□□□□ 0.65
RFC3P40938 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.14■□□□□ 0.65
RFC3P40938 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFC3P40938 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RFC3P40938 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
RFC3P40938 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RFC3P40938 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFC3P40938 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFC3P40938 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RFC3P40938 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFC3P40938 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.13■□□□□ 0.65
RFC3P40938 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.13■□□□□ 0.65
RFC3P40938 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.13■□□□□ 0.65
RFC3P40938 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RFC3P40938 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFC3P40938 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFC3P40938 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.13■□□□□ 0.65
RFC3P40938 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RFC3P40938 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.13■□□□□ 0.65
RFC3P40938 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.13■□□□□ 0.65
RFC3P40938 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.13■□□□□ 0.65
RFC3P40938 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFC3P40938 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RFC3P40938 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.13■□□□□ 0.65
RFC3P40938 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
RFC3P40938 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.13■□□□□ 0.65
RFC3P40938 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RFC3P40938 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
RFC3P40938 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFC3P40938 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFC3P40938 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
RFC3P40938 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFC3P40938 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.12■□□□□ 0.65
RFC3P40938 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.12■□□□□ 0.65
RFC3P40938 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFC3P40938 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
RFC3P40938 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFC3P40938 AC098934.4-201ENST00000564127 592 ntBASIC19.12■□□□□ 0.65
RFC3P40938 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.12■□□□□ 0.65
RFC3P40938 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.12■□□□□ 0.65
RFC3P40938 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RFC3P40938 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.12■□□□□ 0.65
RFC3P40938 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFC3P40938 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms