Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TM4SF1P30408 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC26.35■■□□□ 1.81
TM4SF1P30408 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TM4SF1P30408 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC26.35■■□□□ 1.81
TM4SF1P30408 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TM4SF1P30408 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TM4SF1P30408 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC26.35■■□□□ 1.81
TM4SF1P30408 FAM197Y4-202ENST00000622692 608 ntBASIC26.35■■□□□ 1.81
TM4SF1P30408 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TM4SF1P30408 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TM4SF1P30408 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
TM4SF1P30408 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.34■■□□□ 1.81
TM4SF1P30408 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TM4SF1P30408 KRT17P3-201ENST00000420566 1262 ntBASIC26.34■■□□□ 1.81
TM4SF1P30408 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TM4SF1P30408 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC26.34■■□□□ 1.81
TM4SF1P30408 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
TM4SF1P30408 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TM4SF1P30408 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC26.34■■□□□ 1.81
TM4SF1P30408 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
TM4SF1P30408 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
TM4SF1P30408 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC26.33■■□□□ 1.81
TM4SF1P30408 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TM4SF1P30408 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC26.33■■□□□ 1.81
TM4SF1P30408 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TM4SF1P30408 MCRIP2P1-201ENST00000394346 511 ntBASIC26.33■■□□□ 1.81
TM4SF1P30408 AC211429.1-201ENST00000415277 523 ntBASIC26.33■■□□□ 1.81
TM4SF1P30408 SLC29A4P2-201ENST00000504749 1089 ntBASIC26.33■■□□□ 1.81
TM4SF1P30408 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC26.33■■□□□ 1.81
TM4SF1P30408 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TM4SF1P30408 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC26.33■■□□□ 1.81
TM4SF1P30408 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC26.33■■□□□ 1.81
TM4SF1P30408 AL589743.5-201ENST00000616611 1050 ntBASIC26.33■■□□□ 1.81
TM4SF1P30408 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TM4SF1P30408 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC26.33■■□□□ 1.81
TM4SF1P30408 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TM4SF1P30408 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TM4SF1P30408 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
TM4SF1P30408 VMO1-204ENST00000441199 741 ntTSL 2 BASIC26.32■■□□□ 1.8
TM4SF1P30408 CDV3P1-201ENST00000471403 739 ntBASIC26.32■■□□□ 1.8
TM4SF1P30408 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
TM4SF1P30408 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC26.32■■□□□ 1.8
TM4SF1P30408 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC26.32■■□□□ 1.8
TM4SF1P30408 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC26.32■■□□□ 1.8
TM4SF1P30408 REXO1L12P-201ENST00000622156 912 ntBASIC26.32■■□□□ 1.8
TM4SF1P30408 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TM4SF1P30408 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TM4SF1P30408 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TM4SF1P30408 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
TM4SF1P30408 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TM4SF1P30408 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC26.31■■□□□ 1.8
TM4SF1P30408 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TM4SF1P30408 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TM4SF1P30408 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TM4SF1P30408 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TM4SF1P30408 SPIB-206ENST00000596074 847 ntTSL 2 BASIC26.31■■□□□ 1.8
TM4SF1P30408 AC092368.3-202ENST00000574180 1591 ntBASIC26.31■■□□□ 1.8
TM4SF1P30408 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
TM4SF1P30408 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
TM4SF1P30408 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
TM4SF1P30408 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TM4SF1P30408 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TM4SF1P30408 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
TM4SF1P30408 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC26.3■■□□□ 1.8
TM4SF1P30408 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TM4SF1P30408 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC26.3■■□□□ 1.8
TM4SF1P30408 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC26.3■■□□□ 1.8
TM4SF1P30408 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC26.3■■□□□ 1.8
TM4SF1P30408 FAM210CP-201ENST00000445714 574 ntBASIC26.3■■□□□ 1.8
TM4SF1P30408 SNORA78-201ENST00000459373 127 ntBASIC26.3■■□□□ 1.8
TM4SF1P30408 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC26.3■■□□□ 1.8
TM4SF1P30408 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TM4SF1P30408 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC26.3■■□□□ 1.8
TM4SF1P30408 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC26.3■■□□□ 1.8
TM4SF1P30408 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.29■■□□□ 1.8
TM4SF1P30408 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC26.29■■□□□ 1.8
TM4SF1P30408 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
TM4SF1P30408 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TM4SF1P30408 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TM4SF1P30408 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
TM4SF1P30408 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TM4SF1P30408 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC26.29■■□□□ 1.8
TM4SF1P30408 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC26.29■■□□□ 1.8
TM4SF1P30408 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC26.29■■□□□ 1.8
TM4SF1P30408 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TM4SF1P30408 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TM4SF1P30408 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TM4SF1P30408 GCK-205ENST00000437084 1385 ntTSL 5 BASIC26.29■■□□□ 1.8
TM4SF1P30408 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TM4SF1P30408 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TM4SF1P30408 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TM4SF1P30408 KRT18P68-201ENST00000392293 1000 ntBASIC26.28■■□□□ 1.8
TM4SF1P30408 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
TM4SF1P30408 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TM4SF1P30408 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC26.28■■□□□ 1.8
TM4SF1P30408 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC26.27■■□□□ 1.8
TM4SF1P30408 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
TM4SF1P30408 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TM4SF1P30408 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC26.27■■□□□ 1.8
TM4SF1P30408 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms