Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 TOLLIP-AS1-201ENST00000530897 939 ntBASIC27.96■■■□□ 2.07
RXRBP28702 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC27.96■■■□□ 2.07
RXRBP28702 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC27.96■■■□□ 2.07
RXRBP28702 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC27.96■■■□□ 2.07
RXRBP28702 CABP2-204ENST00000636477 941 ntTSL 5 BASIC27.96■■■□□ 2.07
RXRBP28702 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
RXRBP28702 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC27.95■■■□□ 2.07
RXRBP28702 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC27.95■■■□□ 2.06
RXRBP28702 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC27.95■■■□□ 2.06
RXRBP28702 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC27.95■■■□□ 2.06
RXRBP28702 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC27.95■■■□□ 2.06
RXRBP28702 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC27.95■■■□□ 2.06
RXRBP28702 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
RXRBP28702 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC27.94■■■□□ 2.06
RXRBP28702 RBM42-202ENST00000586618 771 ntTSL 3 BASIC27.94■■■□□ 2.06
RXRBP28702 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC27.94■■■□□ 2.06
RXRBP28702 AC006557.6-201ENST00000623071 864 ntBASIC27.94■■■□□ 2.06
RXRBP28702 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC27.94■■■□□ 2.06
RXRBP28702 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC27.94■■■□□ 2.06
RXRBP28702 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC27.94■■■□□ 2.06
RXRBP28702 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
RXRBP28702 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
RXRBP28702 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
RXRBP28702 NXN-202ENST00000537628 1340 ntTSL 3 BASIC27.93■■■□□ 2.06
RXRBP28702 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC27.93■■■□□ 2.06
RXRBP28702 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
RXRBP28702 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC27.93■■■□□ 2.06
RXRBP28702 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC27.93■■■□□ 2.06
RXRBP28702 KRT18P68-201ENST00000392293 1000 ntBASIC27.93■■■□□ 2.06
RXRBP28702 UPK3BP1-201ENST00000428678 509 ntBASIC27.93■■■□□ 2.06
RXRBP28702 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC27.93■■■□□ 2.06
RXRBP28702 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC27.93■■■□□ 2.06
RXRBP28702 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
RXRBP28702 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC27.93■■■□□ 2.06
RXRBP28702 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
RXRBP28702 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC27.92■■■□□ 2.06
RXRBP28702 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC27.92■■■□□ 2.06
RXRBP28702 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC27.92■■■□□ 2.06
RXRBP28702 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
RXRBP28702 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
RXRBP28702 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
RXRBP28702 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
RXRBP28702 TERF1P1-201ENST00000311003 1181 ntBASIC27.91■■■□□ 2.06
RXRBP28702 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC27.91■■■□□ 2.06
RXRBP28702 AL137013.1-201ENST00000432946 1228 ntBASIC27.91■■■□□ 2.06
RXRBP28702 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
RXRBP28702 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC27.91■■■□□ 2.06
RXRBP28702 CFL2-205ENST00000555765 632 ntTSL 2 BASIC27.91■■■□□ 2.06
RXRBP28702 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC27.91■■■□□ 2.06
RXRBP28702 Six3os1_6.1-201ENST00000620790 196 ntBASIC27.91■■■□□ 2.06
RXRBP28702 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC27.91■■■□□ 2.06
RXRBP28702 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC27.91■■■□□ 2.06
RXRBP28702 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.91■■■□□ 2.06
RXRBP28702 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC27.9■■■□□ 2.06
RXRBP28702 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
RXRBP28702 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC27.9■■■□□ 2.06
RXRBP28702 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC27.9■■■□□ 2.06
RXRBP28702 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC27.9■■■□□ 2.06
RXRBP28702 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC27.9■■■□□ 2.06
RXRBP28702 AC026396.1-201ENST00000419388 421 ntBASIC27.9■■■□□ 2.06
RXRBP28702 SAPCD2P4-201ENST00000424595 1171 ntBASIC27.9■■■□□ 2.06
RXRBP28702 AC104076.2-201ENST00000448912 469 ntBASIC27.9■■■□□ 2.06
RXRBP28702 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
RXRBP28702 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.06
RXRBP28702 NMU-205ENST00000511469 756 ntTSL 3 BASIC27.9■■■□□ 2.06
RXRBP28702 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC27.9■■■□□ 2.06
RXRBP28702 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
RXRBP28702 METTL23-204ENST00000586752 904 ntTSL 2 BASIC27.9■■■□□ 2.06
RXRBP28702 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
RXRBP28702 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC27.9■■■□□ 2.06
RXRBP28702 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC27.9■■■□□ 2.06
RXRBP28702 AC073508.3-201ENST00000619697 1419 ntBASIC27.9■■■□□ 2.06
RXRBP28702 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
RXRBP28702 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
RXRBP28702 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC27.89■■■□□ 2.06
RXRBP28702 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC27.89■■■□□ 2.06
RXRBP28702 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC27.89■■■□□ 2.06
RXRBP28702 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
RXRBP28702 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC27.89■■■□□ 2.06
RXRBP28702 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
RXRBP28702 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC27.89■■■□□ 2.06
RXRBP28702 GRAP-204ENST00000573099 846 ntTSL 3 BASIC27.89■■■□□ 2.06
RXRBP28702 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
RXRBP28702 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC27.89■■■□□ 2.06
RXRBP28702 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC27.89■■■□□ 2.06
RXRBP28702 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC27.89■■■□□ 2.05
RXRBP28702 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
RXRBP28702 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC27.88■■■□□ 2.05
RXRBP28702 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC27.88■■■□□ 2.05
RXRBP28702 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC27.88■■■□□ 2.05
RXRBP28702 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC27.88■■■□□ 2.05
RXRBP28702 DUT-205ENST00000558813 769 ntTSL 2 BASIC27.88■■■□□ 2.05
RXRBP28702 KRT8P9-201ENST00000558927 1449 ntBASIC27.88■■■□□ 2.05
RXRBP28702 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC27.88■■■□□ 2.05
RXRBP28702 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
RXRBP28702 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
RXRBP28702 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC27.88■■■□□ 2.05
RXRBP28702 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
RXRBP28702 GCK-205ENST00000437084 1385 ntTSL 5 BASIC27.87■■■□□ 2.05
RXRBP28702 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC27.87■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms