Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HTR1BP28222 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HTR1BP28222 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HTR1BP28222 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
HTR1BP28222 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.87■□□□□ 0.93
HTR1BP28222 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.87■□□□□ 0.93
HTR1BP28222 SLC7A5P2-201ENST00000553010 536 ntBASIC20.87■□□□□ 0.93
HTR1BP28222 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.87■□□□□ 0.93
HTR1BP28222 AC013268.1-206ENST00000638368 961 ntBASIC20.87■□□□□ 0.93
HTR1BP28222 AC112229.1-201ENST00000639295 961 ntBASIC20.87■□□□□ 0.93
HTR1BP28222 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HTR1BP28222 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HTR1BP28222 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HTR1BP28222 AC003102.1-202ENST00000563394 1796 ntBASIC20.87■□□□□ 0.93
HTR1BP28222 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
HTR1BP28222 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HTR1BP28222 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.87■□□□□ 0.93
HTR1BP28222 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HTR1BP28222 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
HTR1BP28222 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HTR1BP28222 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
HTR1BP28222 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HTR1BP28222 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.86■□□□□ 0.93
HTR1BP28222 TERF1P5-201ENST00000477545 1207 ntBASIC20.86■□□□□ 0.93
HTR1BP28222 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.86■□□□□ 0.93
HTR1BP28222 AC104771.1-201ENST00000603335 964 ntBASIC20.86■□□□□ 0.93
HTR1BP28222 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
HTR1BP28222 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.86■□□□□ 0.93
HTR1BP28222 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HTR1BP28222 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HTR1BP28222 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HTR1BP28222 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HTR1BP28222 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HTR1BP28222 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HTR1BP28222 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.86■□□□□ 0.93
HTR1BP28222 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
HTR1BP28222 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
HTR1BP28222 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HTR1BP28222 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.85■□□□□ 0.93
HTR1BP28222 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
HTR1BP28222 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HTR1BP28222 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
HTR1BP28222 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.85■□□□□ 0.93
HTR1BP28222 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
HTR1BP28222 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
HTR1BP28222 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
HTR1BP28222 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HTR1BP28222 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.85■□□□□ 0.93
HTR1BP28222 AL121832.2-201ENST00000610979 668 ntBASIC20.85■□□□□ 0.93
HTR1BP28222 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.85■□□□□ 0.93
HTR1BP28222 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.85■□□□□ 0.93
HTR1BP28222 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.85■□□□□ 0.93
HTR1BP28222 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
HTR1BP28222 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
HTR1BP28222 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.85■□□□□ 0.93
HTR1BP28222 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HTR1BP28222 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
HTR1BP28222 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HTR1BP28222 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HTR1BP28222 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HTR1BP28222 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.84■□□□□ 0.93
HTR1BP28222 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.84■□□□□ 0.93
HTR1BP28222 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
HTR1BP28222 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HTR1BP28222 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HTR1BP28222 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.84■□□□□ 0.93
HTR1BP28222 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.84■□□□□ 0.93
HTR1BP28222 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HTR1BP28222 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HTR1BP28222 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HTR1BP28222 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HTR1BP28222 KRT16P2-201ENST00000414673 1423 ntBASIC20.84■□□□□ 0.93
HTR1BP28222 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HTR1BP28222 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HTR1BP28222 ECEL1P1-201ENST00000373592 1742 ntBASIC20.84■□□□□ 0.93
HTR1BP28222 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.84■□□□□ 0.93
HTR1BP28222 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HTR1BP28222 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HTR1BP28222 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HTR1BP28222 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
HTR1BP28222 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HTR1BP28222 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
HTR1BP28222 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HTR1BP28222 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
HTR1BP28222 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HTR1BP28222 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HTR1BP28222 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
HTR1BP28222 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
HTR1BP28222 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HTR1BP28222 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.83■□□□□ 0.92
HTR1BP28222 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HTR1BP28222 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.83■□□□□ 0.92
HTR1BP28222 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.83■□□□□ 0.92
HTR1BP28222 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.92
HTR1BP28222 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HTR1BP28222 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
HTR1BP28222 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HTR1BP28222 CNN2P6-201ENST00000439038 900 ntBASIC20.82■□□□□ 0.92
HTR1BP28222 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.82■□□□□ 0.92
HTR1BP28222 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms