Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 AC010141.2-201ENST00000452426 721 ntBASIC22.08■■□□□ 1.13
MMP8P22894 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
MMP8P22894 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.08■■□□□ 1.13
MMP8P22894 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.08■■□□□ 1.13
MMP8P22894 AC008175.2-201ENST00000612840 297 ntBASIC22.08■■□□□ 1.13
MMP8P22894 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
MMP8P22894 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
MMP8P22894 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
MMP8P22894 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
MMP8P22894 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
MMP8P22894 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
MMP8P22894 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.07■■□□□ 1.12
MMP8P22894 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
MMP8P22894 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.07■■□□□ 1.12
MMP8P22894 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.07■■□□□ 1.12
MMP8P22894 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.07■■□□□ 1.12
MMP8P22894 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.07■■□□□ 1.12
MMP8P22894 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.07■■□□□ 1.12
MMP8P22894 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.07■■□□□ 1.12
MMP8P22894 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.07■■□□□ 1.12
MMP8P22894 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.07■■□□□ 1.12
MMP8P22894 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
MMP8P22894 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.07■■□□□ 1.12
MMP8P22894 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
MMP8P22894 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.07■■□□□ 1.12
MMP8P22894 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC22.07■■□□□ 1.12
MMP8P22894 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
MMP8P22894 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
MMP8P22894 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
MMP8P22894 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.06■■□□□ 1.12
MMP8P22894 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.06■■□□□ 1.12
MMP8P22894 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
MMP8P22894 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.06■■□□□ 1.12
MMP8P22894 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.06■■□□□ 1.12
MMP8P22894 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.06■■□□□ 1.12
MMP8P22894 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
MMP8P22894 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
MMP8P22894 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
MMP8P22894 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
MMP8P22894 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
MMP8P22894 AC004854.2-201ENST00000608450 1441 ntBASIC22.06■■□□□ 1.12
MMP8P22894 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
MMP8P22894 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
MMP8P22894 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
MMP8P22894 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
MMP8P22894 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
MMP8P22894 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.05■■□□□ 1.12
MMP8P22894 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
MMP8P22894 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
MMP8P22894 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
MMP8P22894 DUX4L2-201ENST00000561772 1275 ntBASIC22.05■■□□□ 1.12
MMP8P22894 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.05■■□□□ 1.12
MMP8P22894 DUX4L6-201ENST00000626483 1275 ntBASIC22.05■■□□□ 1.12
MMP8P22894 DUX4L1-201ENST00000627662 1275 ntBASIC22.05■■□□□ 1.12
MMP8P22894 DUX4L8-201ENST00000629013 1275 ntBASIC22.05■■□□□ 1.12
MMP8P22894 DUX4L3-201ENST00000630187 1275 ntBASIC22.05■■□□□ 1.12
MMP8P22894 DUX4L7-201ENST00000630678 1275 ntBASIC22.05■■□□□ 1.12
MMP8P22894 DUX4L5-201ENST00000630834 1275 ntBASIC22.05■■□□□ 1.12
MMP8P22894 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
MMP8P22894 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
MMP8P22894 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
MMP8P22894 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
MMP8P22894 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
MMP8P22894 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
MMP8P22894 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
MMP8P22894 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
MMP8P22894 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.04■■□□□ 1.12
MMP8P22894 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
MMP8P22894 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.04■■□□□ 1.12
MMP8P22894 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
MMP8P22894 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.04■■□□□ 1.12
MMP8P22894 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
MMP8P22894 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
MMP8P22894 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
MMP8P22894 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
MMP8P22894 AC097381.1-201ENST00000429019 1296 ntBASIC22.04■■□□□ 1.12
MMP8P22894 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.04■■□□□ 1.12
MMP8P22894 KRT18P61-201ENST00000585825 1298 ntBASIC22.04■■□□□ 1.12
MMP8P22894 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.04■■□□□ 1.12
MMP8P22894 AP001160.3-201ENST00000601484 763 ntBASIC22.04■■□□□ 1.12
MMP8P22894 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.04■■□□□ 1.12
MMP8P22894 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
MMP8P22894 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.04■■□□□ 1.12
MMP8P22894 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
MMP8P22894 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC22.04■■□□□ 1.12
MMP8P22894 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
MMP8P22894 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
MMP8P22894 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
MMP8P22894 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
MMP8P22894 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.03■■□□□ 1.12
MMP8P22894 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
MMP8P22894 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
MMP8P22894 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
MMP8P22894 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
MMP8P22894 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
MMP8P22894 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
MMP8P22894 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.03■■□□□ 1.12
MMP8P22894 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
MMP8P22894 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
MMP8P22894 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms