Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3BP20337 AFG3L1P-217ENST00000557444 2447 ntBASIC18.34■□□□□ 0.53
RAB3BP20337 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB3BP20337 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
RAB3BP20337 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3BP20337 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3BP20337 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB3BP20337 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3BP20337 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3BP20337 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3BP20337 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RAB3BP20337 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3BP20337 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3BP20337 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB3BP20337 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB3BP20337 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3BP20337 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3BP20337 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3BP20337 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB3BP20337 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.33■□□□□ 0.53
RAB3BP20337 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB3BP20337 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
RAB3BP20337 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.33■□□□□ 0.53
RAB3BP20337 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RAB3BP20337 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RAB3BP20337 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RAB3BP20337 AC010141.3-201ENST00000456659 717 ntBASIC18.33■□□□□ 0.52
RAB3BP20337 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.33■□□□□ 0.52
RAB3BP20337 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB3BP20337 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB3BP20337 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RAB3BP20337 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.33■□□□□ 0.52
RAB3BP20337 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB3BP20337 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
RAB3BP20337 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.33■□□□□ 0.52
RAB3BP20337 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB3BP20337 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB3BP20337 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.32■□□□□ 0.52
RAB3BP20337 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3BP20337 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.32■□□□□ 0.52
RAB3BP20337 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3BP20337 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3BP20337 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3BP20337 pRNA.6-201ENST00000610482 90 ntBASIC18.32■□□□□ 0.52
RAB3BP20337 pRNA.5-201ENST00000612139 90 ntBASIC18.32■□□□□ 0.52
RAB3BP20337 pRNA.11-201ENST00000618423 90 ntBASIC18.32■□□□□ 0.52
RAB3BP20337 pRNA.13-201ENST00000619112 90 ntBASIC18.32■□□□□ 0.52
RAB3BP20337 AL117332.1-201ENST00000622628 974 ntBASIC18.32■□□□□ 0.52
RAB3BP20337 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3BP20337 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3BP20337 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3BP20337 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.32■□□□□ 0.52
RAB3BP20337 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3BP20337 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3BP20337 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
RAB3BP20337 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB3BP20337 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB3BP20337 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.31■□□□□ 0.52
RAB3BP20337 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.31■□□□□ 0.52
RAB3BP20337 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB3BP20337 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.31■□□□□ 0.52
RAB3BP20337 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RAB3BP20337 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RAB3BP20337 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.31■□□□□ 0.52
RAB3BP20337 KRT125P-201ENST00000546827 989 ntBASIC18.31■□□□□ 0.52
RAB3BP20337 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.31■□□□□ 0.52
RAB3BP20337 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB3BP20337 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
RAB3BP20337 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB3BP20337 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.31■□□□□ 0.52
RAB3BP20337 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
RAB3BP20337 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB3BP20337 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RAB3BP20337 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.31■□□□□ 0.52
RAB3BP20337 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB3BP20337 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB3BP20337 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RAB3BP20337 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB3BP20337 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.3■□□□□ 0.52
RAB3BP20337 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB3BP20337 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB3BP20337 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB3BP20337 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.3■□□□□ 0.52
RAB3BP20337 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RAB3BP20337 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RAB3BP20337 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RAB3BP20337 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAB3BP20337 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB3BP20337 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB3BP20337 AC027702.1-201ENST00000563810 1770 ntBASIC18.3■□□□□ 0.52
RAB3BP20337 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.29■□□□□ 0.52
RAB3BP20337 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB3BP20337 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB3BP20337 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB3BP20337 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAB3BP20337 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.29■□□□□ 0.52
RAB3BP20337 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RAB3BP20337 AP004607.7-201ENST00000527152 1677 ntBASIC18.29■□□□□ 0.52
RAB3BP20337 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB3BP20337 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms