Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TPRP12270 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TPRP12270 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TPRP12270 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.86■□□□□ 0.77
TPRP12270 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.86■□□□□ 0.77
TPRP12270 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TPRP12270 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.86■□□□□ 0.77
TPRP12270 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.86■□□□□ 0.77
TPRP12270 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.86■□□□□ 0.77
TPRP12270 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.86■□□□□ 0.77
TPRP12270 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TPRP12270 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.86■□□□□ 0.77
TPRP12270 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.86■□□□□ 0.77
TPRP12270 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.86■□□□□ 0.77
TPRP12270 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TPRP12270 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TPRP12270 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.85■□□□□ 0.77
TPRP12270 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.85■□□□□ 0.77
TPRP12270 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.85■□□□□ 0.77
TPRP12270 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TPRP12270 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TPRP12270 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TPRP12270 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TPRP12270 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
TPRP12270 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.85■□□□□ 0.77
TPRP12270 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TPRP12270 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.85■□□□□ 0.77
TPRP12270 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
TPRP12270 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.85■□□□□ 0.77
TPRP12270 AL589743.5-201ENST00000616611 1050 ntBASIC19.85■□□□□ 0.77
TPRP12270 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.85■□□□□ 0.77
TPRP12270 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.85■□□□□ 0.77
TPRP12270 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TPRP12270 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
TPRP12270 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TPRP12270 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TPRP12270 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TPRP12270 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TPRP12270 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.84■□□□□ 0.77
TPRP12270 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TPRP12270 MMP23A-201ENST00000234610 1017 ntBASIC19.84■□□□□ 0.77
TPRP12270 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TPRP12270 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TPRP12270 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.84■□□□□ 0.77
TPRP12270 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.84■□□□□ 0.77
TPRP12270 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.84■□□□□ 0.77
TPRP12270 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TPRP12270 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TPRP12270 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TPRP12270 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.84■□□□□ 0.77
TPRP12270 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.84■□□□□ 0.77
TPRP12270 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.84■□□□□ 0.77
TPRP12270 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TPRP12270 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.84■□□□□ 0.77
TPRP12270 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.84■□□□□ 0.77
TPRP12270 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TPRP12270 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TPRP12270 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TPRP12270 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.83■□□□□ 0.77
TPRP12270 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TPRP12270 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TPRP12270 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.83■□□□□ 0.77
TPRP12270 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TPRP12270 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.83■□□□□ 0.77
TPRP12270 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.83■□□□□ 0.77
TPRP12270 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.83■□□□□ 0.77
TPRP12270 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.83■□□□□ 0.77
TPRP12270 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.83■□□□□ 0.77
TPRP12270 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TPRP12270 KRT16P2-201ENST00000414673 1423 ntBASIC19.83■□□□□ 0.76
TPRP12270 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TPRP12270 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TPRP12270 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TPRP12270 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.83■□□□□ 0.76
TPRP12270 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TPRP12270 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TPRP12270 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.83■□□□□ 0.76
TPRP12270 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.83■□□□□ 0.76
TPRP12270 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.83■□□□□ 0.76
TPRP12270 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.83■□□□□ 0.76
TPRP12270 AC026471.5-201ENST00000615068 467 ntBASIC19.83■□□□□ 0.76
TPRP12270 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.83■□□□□ 0.76
TPRP12270 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPRP12270 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TPRP12270 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.82■□□□□ 0.76
TPRP12270 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPRP12270 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TPRP12270 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TPRP12270 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPRP12270 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPRP12270 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.82■□□□□ 0.76
TPRP12270 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPRP12270 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TPRP12270 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPRP12270 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPRP12270 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPRP12270 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPRP12270 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.82■□□□□ 0.76
TPRP12270 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TPRP12270 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms