Protein–RNA interactions for Protein: P0DN86

CGB3, Choriogonadotropin subunit beta 3, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB3P0DN86 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CGB3P0DN86 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CGB3P0DN86 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CGB3P0DN86 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CGB3P0DN86 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CGB3P0DN86 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CGB3P0DN86 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CGB3P0DN86 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.23■□□□□ 0.35
CGB3P0DN86 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.23■□□□□ 0.35
CGB3P0DN86 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.23■□□□□ 0.35
CGB3P0DN86 AC104187.1-201ENST00000607510 612 ntBASIC17.23■□□□□ 0.35
CGB3P0DN86 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CGB3P0DN86 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CGB3P0DN86 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.22■□□□□ 0.35
CGB3P0DN86 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CGB3P0DN86 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CGB3P0DN86 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CGB3P0DN86 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.22■□□□□ 0.35
CGB3P0DN86 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CGB3P0DN86 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.22■□□□□ 0.35
CGB3P0DN86 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.22■□□□□ 0.35
CGB3P0DN86 AC097381.1-201ENST00000429019 1296 ntBASIC17.22■□□□□ 0.35
CGB3P0DN86 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CGB3P0DN86 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.22■□□□□ 0.35
CGB3P0DN86 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CGB3P0DN86 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CGB3P0DN86 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CGB3P0DN86 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CGB3P0DN86 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.21■□□□□ 0.35
CGB3P0DN86 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CGB3P0DN86 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CGB3P0DN86 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CGB3P0DN86 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.21■□□□□ 0.35
CGB3P0DN86 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.21■□□□□ 0.35
CGB3P0DN86 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CGB3P0DN86 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CGB3P0DN86 DUX4L2-201ENST00000561772 1275 ntBASIC17.21■□□□□ 0.35
CGB3P0DN86 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CGB3P0DN86 KRT18P61-201ENST00000585825 1298 ntBASIC17.21■□□□□ 0.35
CGB3P0DN86 AP001160.3-201ENST00000601484 763 ntBASIC17.21■□□□□ 0.35
CGB3P0DN86 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
CGB3P0DN86 DUX4L6-201ENST00000626483 1275 ntBASIC17.21■□□□□ 0.35
CGB3P0DN86 DUX4L1-201ENST00000627662 1275 ntBASIC17.21■□□□□ 0.35
CGB3P0DN86 DUX4L8-201ENST00000629013 1275 ntBASIC17.21■□□□□ 0.35
CGB3P0DN86 DUX4L3-201ENST00000630187 1275 ntBASIC17.21■□□□□ 0.35
CGB3P0DN86 DUX4L7-201ENST00000630678 1275 ntBASIC17.21■□□□□ 0.35
CGB3P0DN86 DUX4L5-201ENST00000630834 1275 ntBASIC17.21■□□□□ 0.35
CGB3P0DN86 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CGB3P0DN86 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CGB3P0DN86 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CGB3P0DN86 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CGB3P0DN86 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CGB3P0DN86 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CGB3P0DN86 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
CGB3P0DN86 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.21■□□□□ 0.35
CGB3P0DN86 KRT16P2-201ENST00000414673 1423 ntBASIC17.21■□□□□ 0.34
CGB3P0DN86 AC004854.2-201ENST00000608450 1441 ntBASIC17.21■□□□□ 0.34
CGB3P0DN86 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CGB3P0DN86 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CGB3P0DN86 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CGB3P0DN86 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CGB3P0DN86 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CGB3P0DN86 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CGB3P0DN86 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.2■□□□□ 0.34
CGB3P0DN86 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CGB3P0DN86 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CGB3P0DN86 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CGB3P0DN86 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CGB3P0DN86 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.2■□□□□ 0.34
CGB3P0DN86 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.2■□□□□ 0.34
CGB3P0DN86 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.2■□□□□ 0.34
CGB3P0DN86 MIR6821-201ENST00000617625 74 ntBASIC17.2■□□□□ 0.34
CGB3P0DN86 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.2■□□□□ 0.34
CGB3P0DN86 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CGB3P0DN86 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CGB3P0DN86 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.2■□□□□ 0.34
CGB3P0DN86 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CGB3P0DN86 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CGB3P0DN86 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CGB3P0DN86 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.19■□□□□ 0.34
CGB3P0DN86 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CGB3P0DN86 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CGB3P0DN86 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CGB3P0DN86 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CGB3P0DN86 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.19■□□□□ 0.34
CGB3P0DN86 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CGB3P0DN86 KRT18P20-201ENST00000548986 1279 ntBASIC17.19■□□□□ 0.34
CGB3P0DN86 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.19■□□□□ 0.34
CGB3P0DN86 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.19■□□□□ 0.34
CGB3P0DN86 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CGB3P0DN86 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CGB3P0DN86 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CGB3P0DN86 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.19■□□□□ 0.34
CGB3P0DN86 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CGB3P0DN86 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.19■□□□□ 0.34
CGB3P0DN86 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CGB3P0DN86 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CGB3P0DN86 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CGB3P0DN86 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CGB3P0DN86 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms