Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB40ALP0C0E4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RAB40ALP0C0E4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAB40ALP0C0E4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB40ALP0C0E4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB40ALP0C0E4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB40ALP0C0E4 RBM17P2-201ENST00000616397 1405 ntBASIC19.78■□□□□ 0.76
RAB40ALP0C0E4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RAB40ALP0C0E4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.78■□□□□ 0.76
RAB40ALP0C0E4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB40ALP0C0E4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.78■□□□□ 0.76
RAB40ALP0C0E4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RAB40ALP0C0E4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.78■□□□□ 0.76
RAB40ALP0C0E4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.78■□□□□ 0.76
RAB40ALP0C0E4 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.78■□□□□ 0.76
RAB40ALP0C0E4 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.78■□□□□ 0.76
RAB40ALP0C0E4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
RAB40ALP0C0E4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.78■□□□□ 0.76
RAB40ALP0C0E4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.78■□□□□ 0.76
RAB40ALP0C0E4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RAB40ALP0C0E4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RAB40ALP0C0E4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RAB40ALP0C0E4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB40ALP0C0E4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.78■□□□□ 0.76
RAB40ALP0C0E4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB40ALP0C0E4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB40ALP0C0E4 C1orf229-201ENST00000623686 2258 ntBASIC19.77■□□□□ 0.76
RAB40ALP0C0E4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB40ALP0C0E4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB40ALP0C0E4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RAB40ALP0C0E4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB40ALP0C0E4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RAB40ALP0C0E4 MIPEPP3-201ENST00000412105 444 ntBASIC19.77■□□□□ 0.76
RAB40ALP0C0E4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB40ALP0C0E4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.77■□□□□ 0.76
RAB40ALP0C0E4 AL591742.1-201ENST00000604433 565 ntBASIC19.77■□□□□ 0.76
RAB40ALP0C0E4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.77■□□□□ 0.76
RAB40ALP0C0E4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.77■□□□□ 0.76
RAB40ALP0C0E4 TMEM191A-211ENST00000637163 1067 ntBASIC19.77■□□□□ 0.76
RAB40ALP0C0E4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.77■□□□□ 0.76
RAB40ALP0C0E4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.77■□□□□ 0.76
RAB40ALP0C0E4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.77■□□□□ 0.76
RAB40ALP0C0E4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB40ALP0C0E4 AC003102.1-202ENST00000563394 1796 ntBASIC19.77■□□□□ 0.76
RAB40ALP0C0E4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RAB40ALP0C0E4 GUSBP5-202ENST00000510805 1989 ntBASIC19.77■□□□□ 0.75
RAB40ALP0C0E4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.77■□□□□ 0.75
RAB40ALP0C0E4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RAB40ALP0C0E4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB40ALP0C0E4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB40ALP0C0E4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB40ALP0C0E4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RAB40ALP0C0E4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB40ALP0C0E4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.76■□□□□ 0.75
RAB40ALP0C0E4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB40ALP0C0E4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB40ALP0C0E4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB40ALP0C0E4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RAB40ALP0C0E4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.76■□□□□ 0.75
RAB40ALP0C0E4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.76■□□□□ 0.75
RAB40ALP0C0E4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAB40ALP0C0E4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
RAB40ALP0C0E4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.76■□□□□ 0.75
RAB40ALP0C0E4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAB40ALP0C0E4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB40ALP0C0E4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RAB40ALP0C0E4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB40ALP0C0E4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.76■□□□□ 0.75
RAB40ALP0C0E4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB40ALP0C0E4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAB40ALP0C0E4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB40ALP0C0E4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAB40ALP0C0E4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RAB40ALP0C0E4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.75■□□□□ 0.75
RAB40ALP0C0E4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
RAB40ALP0C0E4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.75■□□□□ 0.75
RAB40ALP0C0E4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.75■□□□□ 0.75
RAB40ALP0C0E4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.75■□□□□ 0.75
RAB40ALP0C0E4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.75■□□□□ 0.75
RAB40ALP0C0E4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB40ALP0C0E4 ECEL1P1-201ENST00000373592 1742 ntBASIC19.75■□□□□ 0.75
RAB40ALP0C0E4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAB40ALP0C0E4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB40ALP0C0E4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB40ALP0C0E4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RAB40ALP0C0E4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB40ALP0C0E4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAB40ALP0C0E4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAB40ALP0C0E4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB40ALP0C0E4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.74■□□□□ 0.75
RAB40ALP0C0E4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.74■□□□□ 0.75
RAB40ALP0C0E4 AC016405.3-201ENST00000607710 860 ntBASIC19.74■□□□□ 0.75
RAB40ALP0C0E4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB40ALP0C0E4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.74■□□□□ 0.75
RAB40ALP0C0E4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB40ALP0C0E4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RAB40ALP0C0E4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
RAB40ALP0C0E4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
RAB40ALP0C0E4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.74■□□□□ 0.75
RAB40ALP0C0E4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms