Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 LINC02228-203ENST00000641970 1355 ntBASIC21.74■■□□□ 1.07
CD48P09326 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CD48P09326 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CD48P09326 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CD48P09326 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CD48P09326 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CD48P09326 KRT87P-202ENST00000534226 1464 ntBASIC21.73■■□□□ 1.07
CD48P09326 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CD48P09326 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.73■■□□□ 1.07
CD48P09326 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.73■■□□□ 1.07
CD48P09326 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CD48P09326 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CD48P09326 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.73■■□□□ 1.07
CD48P09326 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CD48P09326 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.73■■□□□ 1.07
CD48P09326 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
CD48P09326 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.73■■□□□ 1.07
CD48P09326 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CD48P09326 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CD48P09326 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CD48P09326 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.72■■□□□ 1.07
CD48P09326 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CD48P09326 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.72■■□□□ 1.07
CD48P09326 YBX1P1-201ENST00000445822 960 ntBASIC21.72■■□□□ 1.07
CD48P09326 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CD48P09326 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.72■■□□□ 1.07
CD48P09326 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CD48P09326 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CD48P09326 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CD48P09326 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CD48P09326 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CD48P09326 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CD48P09326 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CD48P09326 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CD48P09326 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.71■■□□□ 1.07
CD48P09326 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CD48P09326 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.71■■□□□ 1.07
CD48P09326 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CD48P09326 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.71■■□□□ 1.07
CD48P09326 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.71■■□□□ 1.07
CD48P09326 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.71■■□□□ 1.07
CD48P09326 TERF1P2-201ENST00000583350 1212 ntBASIC21.71■■□□□ 1.07
CD48P09326 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CD48P09326 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CD48P09326 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CD48P09326 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.71■■□□□ 1.07
CD48P09326 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.71■■□□□ 1.07
CD48P09326 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CD48P09326 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CD48P09326 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.7■■□□□ 1.06
CD48P09326 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CD48P09326 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CD48P09326 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CD48P09326 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.7■■□□□ 1.06
CD48P09326 AC123595.1-201ENST00000440769 1046 ntBASIC21.7■■□□□ 1.06
CD48P09326 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.7■■□□□ 1.06
CD48P09326 CCDC92B-201ENST00000575506 885 ntBASIC21.7■■□□□ 1.06
CD48P09326 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CD48P09326 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CD48P09326 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.7■■□□□ 1.06
CD48P09326 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CD48P09326 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CD48P09326 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CD48P09326 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CD48P09326 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CD48P09326 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CD48P09326 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.69■■□□□ 1.06
CD48P09326 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CD48P09326 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CD48P09326 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CD48P09326 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CD48P09326 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CD48P09326 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.69■■□□□ 1.06
CD48P09326 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.69■■□□□ 1.06
CD48P09326 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CD48P09326 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.69■■□□□ 1.06
CD48P09326 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CD48P09326 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.69■■□□□ 1.06
CD48P09326 AL157384.1-201ENST00000445995 2473 ntBASIC21.69■■□□□ 1.06
CD48P09326 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CD48P09326 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.69■■□□□ 1.06
CD48P09326 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CD48P09326 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CD48P09326 PLK5-205ENST00000642079 1969 ntBASIC21.68■■□□□ 1.06
CD48P09326 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CD48P09326 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CD48P09326 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CD48P09326 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CD48P09326 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.68■■□□□ 1.06
CD48P09326 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CD48P09326 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.68■■□□□ 1.06
CD48P09326 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.68■■□□□ 1.06
CD48P09326 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CD48P09326 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CD48P09326 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CD48P09326 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CD48P09326 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.68■■□□□ 1.06
CD48P09326 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.68■■□□□ 1.06
CD48P09326 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CD48P09326 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms