Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RETP07949 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RETP07949 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RETP07949 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RETP07949 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RETP07949 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.17■□□□□ 0.98
RETP07949 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
RETP07949 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.17■□□□□ 0.98
RETP07949 MIR718-201ENST00000390190 70 ntBASIC21.17■□□□□ 0.98
RETP07949 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.17■□□□□ 0.98
RETP07949 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.17■□□□□ 0.98
RETP07949 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
RETP07949 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
RETP07949 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.17■□□□□ 0.98
RETP07949 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RETP07949 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.17■□□□□ 0.98
RETP07949 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.17■□□□□ 0.98
RETP07949 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.17■□□□□ 0.98
RETP07949 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
RETP07949 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RETP07949 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RETP07949 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RETP07949 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RETP07949 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RETP07949 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.16■□□□□ 0.98
RETP07949 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
RETP07949 FAM210CP-201ENST00000445714 574 ntBASIC21.16■□□□□ 0.98
RETP07949 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.16■□□□□ 0.98
RETP07949 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RETP07949 AP003097.1-201ENST00000530657 1135 ntBASIC21.16■□□□□ 0.98
RETP07949 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.16■□□□□ 0.98
RETP07949 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RETP07949 AC073912.3-201ENST00000624414 853 ntBASIC21.16■□□□□ 0.98
RETP07949 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RETP07949 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RETP07949 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RETP07949 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RETP07949 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.15■□□□□ 0.98
RETP07949 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RETP07949 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
RETP07949 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.15■□□□□ 0.98
RETP07949 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RETP07949 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RETP07949 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RETP07949 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RETP07949 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
RETP07949 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.15■□□□□ 0.98
RETP07949 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RETP07949 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RETP07949 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
RETP07949 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.14■□□□□ 0.98
RETP07949 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
RETP07949 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RETP07949 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RETP07949 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RETP07949 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RETP07949 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
RETP07949 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
RETP07949 ECEL1P3-201ENST00000427961 737 ntBASIC21.14■□□□□ 0.97
RETP07949 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RETP07949 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RETP07949 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RETP07949 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.14■□□□□ 0.97
RETP07949 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RETP07949 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RETP07949 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
RETP07949 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RETP07949 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RETP07949 AC242852.2-201ENST00000615738 1807 ntBASIC21.13■□□□□ 0.97
RETP07949 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RETP07949 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RETP07949 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RETP07949 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
RETP07949 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RETP07949 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RETP07949 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RETP07949 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RETP07949 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RETP07949 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.13■□□□□ 0.97
RETP07949 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RETP07949 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.13■□□□□ 0.97
RETP07949 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RETP07949 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.13■□□□□ 0.97
RETP07949 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.13■□□□□ 0.97
RETP07949 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.13■□□□□ 0.97
RETP07949 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RETP07949 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RETP07949 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RETP07949 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RETP07949 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RETP07949 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RETP07949 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RETP07949 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RETP07949 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
RETP07949 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.13■□□□□ 0.97
RETP07949 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
RETP07949 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
RETP07949 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RETP07949 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RETP07949 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms