Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.17■□□□□ 0.66
P04436 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
P04436 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.17■□□□□ 0.66
P04436 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P04436 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P04436 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
P04436 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
P04436 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P04436 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.17■□□□□ 0.66
P04436 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.17■□□□□ 0.66
P04436 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
P04436 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
P04436 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
P04436 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
P04436 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.17■□□□□ 0.66
P04436 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
P04436 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P04436 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.17■□□□□ 0.66
P04436 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.17■□□□□ 0.66
P04436 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
P04436 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
P04436 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
P04436 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
P04436 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
P04436 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
P04436 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
P04436 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
P04436 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
P04436 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
P04436 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
P04436 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
P04436 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
P04436 GPX1P1-201ENST00000388829 606 ntBASIC19.16■□□□□ 0.66
P04436 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.16■□□□□ 0.66
P04436 NCF1B-203ENST00000435988 1254 ntBASIC19.16■□□□□ 0.66
P04436 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.16■□□□□ 0.66
P04436 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.16■□□□□ 0.66
P04436 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
P04436 AC007322.4-201ENST00000509611 723 ntBASIC19.16■□□□□ 0.66
P04436 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
P04436 AL121832.2-201ENST00000610979 668 ntBASIC19.16■□□□□ 0.66
P04436 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.16■□□□□ 0.66
P04436 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.16■□□□□ 0.66
P04436 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
P04436 AC133561.1-201ENST00000568600 2415 ntBASIC19.16■□□□□ 0.66
P04436 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
P04436 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.16■□□□□ 0.66
P04436 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
P04436 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.15■□□□□ 0.66
P04436 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
P04436 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P04436 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
P04436 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P04436 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.15■□□□□ 0.66
P04436 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P04436 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.15■□□□□ 0.66
P04436 AC245052.3-201ENST00000450182 901 ntBASIC19.15■□□□□ 0.66
P04436 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.15■□□□□ 0.66
P04436 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
P04436 AL109923.1-201ENST00000618799 583 ntBASIC19.15■□□□□ 0.66
P04436 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.15■□□□□ 0.66
P04436 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P04436 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
P04436 RBM17P2-201ENST00000616397 1405 ntBASIC19.15■□□□□ 0.66
P04436 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P04436 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.15■□□□□ 0.66
P04436 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
P04436 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P04436 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.15■□□□□ 0.66
P04436 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P04436 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.14■□□□□ 0.65
P04436 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.14■□□□□ 0.65
P04436 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
P04436 AC243732.1-201ENST00000612648 864 ntBASIC19.14■□□□□ 0.65
P04436 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
P04436 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P04436 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P04436 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P04436 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P04436 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
P04436 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
P04436 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.13■□□□□ 0.65
P04436 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.13■□□□□ 0.65
P04436 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
P04436 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
P04436 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
P04436 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
P04436 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
P04436 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
P04436 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
P04436 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.13■□□□□ 0.65
P04436 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.13■□□□□ 0.65
P04436 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
P04436 AC008694.1-202ENST00000636953 945 ntBASIC19.13■□□□□ 0.65
P04436 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
P04436 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
P04436 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.13■□□□□ 0.65
P04436 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
P04436 AC068338.2-201ENST00000563278 1430 ntBASIC19.12■□□□□ 0.65
P04436 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms