Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
APOEP02649 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.94■■□□□ 1.1
APOEP02649 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
APOEP02649 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
APOEP02649 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
APOEP02649 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
APOEP02649 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
APOEP02649 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
APOEP02649 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
APOEP02649 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
APOEP02649 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.93■■□□□ 1.1
APOEP02649 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
APOEP02649 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.93■■□□□ 1.1
APOEP02649 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
APOEP02649 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
APOEP02649 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.93■■□□□ 1.1
APOEP02649 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.93■■□□□ 1.1
APOEP02649 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.93■■□□□ 1.1
APOEP02649 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.93■■□□□ 1.1
APOEP02649 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
APOEP02649 AC008175.2-201ENST00000612840 297 ntBASIC21.93■■□□□ 1.1
APOEP02649 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
APOEP02649 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.93■■□□□ 1.1
APOEP02649 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
APOEP02649 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.92■■□□□ 1.1
APOEP02649 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
APOEP02649 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
APOEP02649 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
APOEP02649 KRT18P11-201ENST00000435214 1283 ntBASIC21.92■■□□□ 1.1
APOEP02649 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
APOEP02649 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.92■■□□□ 1.1
APOEP02649 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.92■■□□□ 1.1
APOEP02649 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.92■■□□□ 1.1
APOEP02649 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
APOEP02649 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
APOEP02649 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
APOEP02649 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.92■■□□□ 1.1
APOEP02649 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
APOEP02649 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
APOEP02649 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
APOEP02649 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
APOEP02649 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
APOEP02649 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
APOEP02649 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
APOEP02649 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.91■■□□□ 1.1
APOEP02649 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
APOEP02649 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
APOEP02649 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
APOEP02649 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
APOEP02649 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.91■■□□□ 1.1
APOEP02649 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.91■■□□□ 1.1
APOEP02649 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
APOEP02649 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.9■■□□□ 1.1
APOEP02649 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.9■■□□□ 1.1
APOEP02649 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
APOEP02649 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.9■■□□□ 1.1
APOEP02649 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
APOEP02649 AC006015.1-201ENST00000429970 570 ntBASIC21.9■■□□□ 1.1
APOEP02649 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
APOEP02649 KRT18P20-201ENST00000548986 1279 ntBASIC21.9■■□□□ 1.1
APOEP02649 AC092437.1-201ENST00000624794 1048 ntBASIC21.9■■□□□ 1.1
APOEP02649 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
APOEP02649 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.9■■□□□ 1.1
APOEP02649 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
APOEP02649 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.9■■□□□ 1.1
APOEP02649 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
APOEP02649 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
APOEP02649 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
APOEP02649 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
APOEP02649 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.89■■□□□ 1.09
APOEP02649 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
APOEP02649 AC120498.10-201ENST00000621827 505 ntBASIC21.89■■□□□ 1.09
APOEP02649 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.89■■□□□ 1.09
APOEP02649 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.89■■□□□ 1.09
APOEP02649 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
APOEP02649 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
APOEP02649 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
APOEP02649 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
APOEP02649 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
APOEP02649 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.88■■□□□ 1.09
APOEP02649 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
APOEP02649 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
APOEP02649 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
APOEP02649 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
APOEP02649 POU5F1P4-201ENST00000413175 1085 ntBASIC21.88■■□□□ 1.09
APOEP02649 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.88■■□□□ 1.09
APOEP02649 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.88■■□□□ 1.09
APOEP02649 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.88■■□□□ 1.09
APOEP02649 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.88■■□□□ 1.09
APOEP02649 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
APOEP02649 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.88■■□□□ 1.09
APOEP02649 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.88■■□□□ 1.09
APOEP02649 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
APOEP02649 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
APOEP02649 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
APOEP02649 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
APOEP02649 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.87■■□□□ 1.09
APOEP02649 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.87■■□□□ 1.09
APOEP02649 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.87■■□□□ 1.09
APOEP02649 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms