Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.27■□□□□ 0.36
TGFAP01135 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TGFAP01135 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.27■□□□□ 0.36
TGFAP01135 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.27■□□□□ 0.36
TGFAP01135 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.27■□□□□ 0.36
TGFAP01135 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TGFAP01135 AC142381.4-202ENST00000563973 229 ntBASIC17.27■□□□□ 0.36
TGFAP01135 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.27■□□□□ 0.36
TGFAP01135 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TGFAP01135 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.27■□□□□ 0.36
TGFAP01135 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TGFAP01135 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TGFAP01135 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.27■□□□□ 0.35
TGFAP01135 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TGFAP01135 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TGFAP01135 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TGFAP01135 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TGFAP01135 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.26■□□□□ 0.35
TGFAP01135 AC098590.1-201ENST00000468126 897 ntBASIC17.26■□□□□ 0.35
TGFAP01135 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.26■□□□□ 0.35
TGFAP01135 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.26■□□□□ 0.35
TGFAP01135 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.26■□□□□ 0.35
TGFAP01135 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.26■□□□□ 0.35
TGFAP01135 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
TGFAP01135 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TGFAP01135 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.26■□□□□ 0.35
TGFAP01135 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TGFAP01135 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TGFAP01135 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TGFAP01135 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.25■□□□□ 0.35
TGFAP01135 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TGFAP01135 AC128676.1-201ENST00000454392 318 ntBASIC17.25■□□□□ 0.35
TGFAP01135 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.25■□□□□ 0.35
TGFAP01135 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TGFAP01135 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TGFAP01135 AC003102.1-202ENST00000563394 1796 ntBASIC17.25■□□□□ 0.35
TGFAP01135 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TGFAP01135 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TGFAP01135 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TGFAP01135 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TGFAP01135 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TGFAP01135 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TGFAP01135 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TGFAP01135 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.24■□□□□ 0.35
TGFAP01135 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.24■□□□□ 0.35
TGFAP01135 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TGFAP01135 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.24■□□□□ 0.35
TGFAP01135 GCSHP5-201ENST00000443090 522 ntBASIC17.24■□□□□ 0.35
TGFAP01135 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.24■□□□□ 0.35
TGFAP01135 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.24■□□□□ 0.35
TGFAP01135 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.24■□□□□ 0.35
TGFAP01135 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.24■□□□□ 0.35
TGFAP01135 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
TGFAP01135 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.24■□□□□ 0.35
TGFAP01135 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.24■□□□□ 0.35
TGFAP01135 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.24■□□□□ 0.35
TGFAP01135 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TGFAP01135 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
TGFAP01135 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TGFAP01135 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.24■□□□□ 0.35
TGFAP01135 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TGFAP01135 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TGFAP01135 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TGFAP01135 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TGFAP01135 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TGFAP01135 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TGFAP01135 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TGFAP01135 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TGFAP01135 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TGFAP01135 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TGFAP01135 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TGFAP01135 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.23■□□□□ 0.35
TGFAP01135 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.23■□□□□ 0.35
TGFAP01135 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.23■□□□□ 0.35
TGFAP01135 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TGFAP01135 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.23■□□□□ 0.35
TGFAP01135 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TGFAP01135 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TGFAP01135 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TGFAP01135 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TGFAP01135 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.23■□□□□ 0.35
TGFAP01135 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
TGFAP01135 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TGFAP01135 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TGFAP01135 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TGFAP01135 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.22■□□□□ 0.35
TGFAP01135 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TGFAP01135 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.22■□□□□ 0.35
TGFAP01135 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TGFAP01135 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TGFAP01135 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TGFAP01135 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.22■□□□□ 0.35
TGFAP01135 CDV3P1-201ENST00000471403 739 ntBASIC17.22■□□□□ 0.35
TGFAP01135 AC026366.1-201ENST00000488803 879 ntBASIC17.22■□□□□ 0.35
TGFAP01135 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TGFAP01135 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.22■□□□□ 0.35
TGFAP01135 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.22■□□□□ 0.35
TGFAP01135 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TGFAP01135 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TGFAP01135 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms