Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GPC4O75487 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.93■□□□□ 0.94
GPC4O75487 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.93■□□□□ 0.94
GPC4O75487 AC003102.1-202ENST00000563394 1796 ntBASIC20.93■□□□□ 0.94
GPC4O75487 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
GPC4O75487 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.93■□□□□ 0.94
GPC4O75487 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GPC4O75487 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
GPC4O75487 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GPC4O75487 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GPC4O75487 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
GPC4O75487 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GPC4O75487 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GPC4O75487 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GPC4O75487 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.92■□□□□ 0.94
GPC4O75487 YBX1P1-201ENST00000445822 960 ntBASIC20.92■□□□□ 0.94
GPC4O75487 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
GPC4O75487 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.92■□□□□ 0.94
GPC4O75487 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.92■□□□□ 0.94
GPC4O75487 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.92■□□□□ 0.94
GPC4O75487 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GPC4O75487 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.92■□□□□ 0.94
GPC4O75487 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GPC4O75487 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
GPC4O75487 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
GPC4O75487 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
GPC4O75487 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
GPC4O75487 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GPC4O75487 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GPC4O75487 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GPC4O75487 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.91■□□□□ 0.94
GPC4O75487 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.91■□□□□ 0.94
GPC4O75487 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.91■□□□□ 0.94
GPC4O75487 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GPC4O75487 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
GPC4O75487 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GPC4O75487 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
GPC4O75487 Z98882.1-201ENST00000622160 2253 ntBASIC20.9■□□□□ 0.94
GPC4O75487 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GPC4O75487 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
GPC4O75487 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GPC4O75487 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
GPC4O75487 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GPC4O75487 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GPC4O75487 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.9■□□□□ 0.94
GPC4O75487 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.9■□□□□ 0.94
GPC4O75487 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
GPC4O75487 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
GPC4O75487 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GPC4O75487 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GPC4O75487 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
GPC4O75487 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
GPC4O75487 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GPC4O75487 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
GPC4O75487 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GPC4O75487 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GPC4O75487 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
GPC4O75487 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
GPC4O75487 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.89■□□□□ 0.94
GPC4O75487 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
GPC4O75487 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
GPC4O75487 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.89■□□□□ 0.94
GPC4O75487 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
GPC4O75487 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
GPC4O75487 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
GPC4O75487 LINC02228-203ENST00000641970 1355 ntBASIC20.89■□□□□ 0.93
GPC4O75487 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GPC4O75487 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GPC4O75487 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GPC4O75487 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GPC4O75487 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GPC4O75487 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.89■□□□□ 0.93
GPC4O75487 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.89■□□□□ 0.93
GPC4O75487 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GPC4O75487 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
GPC4O75487 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.89■□□□□ 0.93
GPC4O75487 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
GPC4O75487 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
GPC4O75487 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.88■□□□□ 0.93
GPC4O75487 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GPC4O75487 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GPC4O75487 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.88■□□□□ 0.93
GPC4O75487 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.88■□□□□ 0.93
GPC4O75487 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.88■□□□□ 0.93
GPC4O75487 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GPC4O75487 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.88■□□□□ 0.93
GPC4O75487 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GPC4O75487 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.88■□□□□ 0.93
GPC4O75487 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.88■□□□□ 0.93
GPC4O75487 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
GPC4O75487 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GPC4O75487 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.88■□□□□ 0.93
GPC4O75487 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GPC4O75487 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
GPC4O75487 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.88■□□□□ 0.93
GPC4O75487 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.88■□□□□ 0.93
GPC4O75487 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GPC4O75487 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
GPC4O75487 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GPC4O75487 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms