Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX39AO00148 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
DDX39AO00148 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.65■■□□□ 1.38
DDX39AO00148 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX39AO00148 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX39AO00148 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
DDX39AO00148 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
DDX39AO00148 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX39AO00148 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX39AO00148 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
DDX39AO00148 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
DDX39AO00148 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
DDX39AO00148 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.64■■□□□ 1.38
DDX39AO00148 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
DDX39AO00148 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
DDX39AO00148 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.64■■□□□ 1.38
DDX39AO00148 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.64■■□□□ 1.38
DDX39AO00148 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
DDX39AO00148 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
DDX39AO00148 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
DDX39AO00148 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.64■■□□□ 1.37
DDX39AO00148 KRT16P2-201ENST00000414673 1423 ntBASIC23.64■■□□□ 1.37
DDX39AO00148 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
DDX39AO00148 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
DDX39AO00148 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.63■■□□□ 1.37
DDX39AO00148 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
DDX39AO00148 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
DDX39AO00148 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.63■■□□□ 1.37
DDX39AO00148 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
DDX39AO00148 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
DDX39AO00148 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.63■■□□□ 1.37
DDX39AO00148 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
DDX39AO00148 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
DDX39AO00148 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.63■■□□□ 1.37
DDX39AO00148 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.63■■□□□ 1.37
DDX39AO00148 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
DDX39AO00148 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
DDX39AO00148 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
DDX39AO00148 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.62■■□□□ 1.37
DDX39AO00148 FBXW4P1-201ENST00000426721 2239 ntBASIC23.62■■□□□ 1.37
DDX39AO00148 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.62■■□□□ 1.37
DDX39AO00148 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
DDX39AO00148 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.62■■□□□ 1.37
DDX39AO00148 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.62■■□□□ 1.37
DDX39AO00148 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
DDX39AO00148 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.62■■□□□ 1.37
DDX39AO00148 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
DDX39AO00148 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
DDX39AO00148 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.61■■□□□ 1.37
DDX39AO00148 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
DDX39AO00148 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
DDX39AO00148 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC23.61■■□□□ 1.37
DDX39AO00148 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.61■■□□□ 1.37
DDX39AO00148 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.61■■□□□ 1.37
DDX39AO00148 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.61■■□□□ 1.37
DDX39AO00148 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.61■■□□□ 1.37
DDX39AO00148 AC013268.1-206ENST00000638368 961 ntBASIC23.61■■□□□ 1.37
DDX39AO00148 AC112229.1-201ENST00000639295 961 ntBASIC23.61■■□□□ 1.37
DDX39AO00148 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
DDX39AO00148 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
DDX39AO00148 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
DDX39AO00148 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.6■■□□□ 1.37
DDX39AO00148 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.6■■□□□ 1.37
DDX39AO00148 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
DDX39AO00148 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
DDX39AO00148 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
DDX39AO00148 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.6■■□□□ 1.37
DDX39AO00148 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
DDX39AO00148 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.6■■□□□ 1.37
DDX39AO00148 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.6■■□□□ 1.37
DDX39AO00148 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC23.6■■□□□ 1.37
DDX39AO00148 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.6■■□□□ 1.37
DDX39AO00148 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.6■■□□□ 1.37
DDX39AO00148 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
DDX39AO00148 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX39AO00148 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX39AO00148 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
DDX39AO00148 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
DDX39AO00148 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX39AO00148 NCF1B-203ENST00000435988 1254 ntBASIC23.59■■□□□ 1.37
DDX39AO00148 AL109923.1-201ENST00000618799 583 ntBASIC23.59■■□□□ 1.37
DDX39AO00148 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
DDX39AO00148 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
DDX39AO00148 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX39AO00148 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.59■■□□□ 1.37
DDX39AO00148 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
DDX39AO00148 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
DDX39AO00148 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.58■■□□□ 1.37
DDX39AO00148 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.58■■□□□ 1.37
DDX39AO00148 AC104771.1-201ENST00000603335 964 ntBASIC23.58■■□□□ 1.37
DDX39AO00148 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
DDX39AO00148 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
DDX39AO00148 RBM17P2-201ENST00000616397 1405 ntBASIC23.58■■□□□ 1.36
DDX39AO00148 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
DDX39AO00148 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
DDX39AO00148 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
DDX39AO00148 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.57■■□□□ 1.36
DDX39AO00148 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.57■■□□□ 1.36
DDX39AO00148 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
DDX39AO00148 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms