Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CFAP99D6REC4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.87■□□□□ 0.93
CFAP99D6REC4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.87■□□□□ 0.93
CFAP99D6REC4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.87■□□□□ 0.93
CFAP99D6REC4 AC138907.5-202ENST00000569484 235 ntBASIC20.87■□□□□ 0.93
CFAP99D6REC4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CFAP99D6REC4 AC104187.1-201ENST00000607510 612 ntBASIC20.87■□□□□ 0.93
CFAP99D6REC4 AC008175.2-201ENST00000612840 297 ntBASIC20.87■□□□□ 0.93
CFAP99D6REC4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CFAP99D6REC4 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.87■□□□□ 0.93
CFAP99D6REC4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.87■□□□□ 0.93
CFAP99D6REC4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CFAP99D6REC4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CFAP99D6REC4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CFAP99D6REC4 AP004607.4-201ENST00000530158 1459 ntBASIC20.87■□□□□ 0.93
CFAP99D6REC4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CFAP99D6REC4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.86■□□□□ 0.93
CFAP99D6REC4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CFAP99D6REC4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CFAP99D6REC4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CFAP99D6REC4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CFAP99D6REC4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CFAP99D6REC4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CFAP99D6REC4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CFAP99D6REC4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CFAP99D6REC4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.86■□□□□ 0.93
CFAP99D6REC4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.86■□□□□ 0.93
CFAP99D6REC4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CFAP99D6REC4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.86■□□□□ 0.93
CFAP99D6REC4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CFAP99D6REC4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CFAP99D6REC4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CFAP99D6REC4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CFAP99D6REC4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CFAP99D6REC4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CFAP99D6REC4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CFAP99D6REC4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.85■□□□□ 0.93
CFAP99D6REC4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.85■□□□□ 0.93
CFAP99D6REC4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CFAP99D6REC4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CFAP99D6REC4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
CFAP99D6REC4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CFAP99D6REC4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CFAP99D6REC4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CFAP99D6REC4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CFAP99D6REC4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CFAP99D6REC4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CFAP99D6REC4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CFAP99D6REC4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CFAP99D6REC4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CFAP99D6REC4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CFAP99D6REC4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CFAP99D6REC4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.85■□□□□ 0.93
CFAP99D6REC4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.84■□□□□ 0.93
CFAP99D6REC4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CFAP99D6REC4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CFAP99D6REC4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.84■□□□□ 0.93
CFAP99D6REC4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.84■□□□□ 0.93
CFAP99D6REC4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CFAP99D6REC4 POU5F1P4-201ENST00000413175 1085 ntBASIC20.84■□□□□ 0.93
CFAP99D6REC4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CFAP99D6REC4 AC010141.2-201ENST00000452426 721 ntBASIC20.84■□□□□ 0.93
CFAP99D6REC4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CFAP99D6REC4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
CFAP99D6REC4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CFAP99D6REC4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CFAP99D6REC4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CFAP99D6REC4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.84■□□□□ 0.93
CFAP99D6REC4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CFAP99D6REC4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CFAP99D6REC4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CFAP99D6REC4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.84■□□□□ 0.93
CFAP99D6REC4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CFAP99D6REC4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CFAP99D6REC4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.83■□□□□ 0.93
CFAP99D6REC4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CFAP99D6REC4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CFAP99D6REC4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CFAP99D6REC4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.83■□□□□ 0.93
CFAP99D6REC4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.83■□□□□ 0.93
CFAP99D6REC4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CFAP99D6REC4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.83■□□□□ 0.93
CFAP99D6REC4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.83■□□□□ 0.93
CFAP99D6REC4 AP001160.3-201ENST00000601484 763 ntBASIC20.83■□□□□ 0.93
CFAP99D6REC4 AC120498.10-201ENST00000621827 505 ntBASIC20.83■□□□□ 0.93
CFAP99D6REC4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CFAP99D6REC4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.83■□□□□ 0.92
CFAP99D6REC4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CFAP99D6REC4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CFAP99D6REC4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CFAP99D6REC4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
CFAP99D6REC4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CFAP99D6REC4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CFAP99D6REC4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CFAP99D6REC4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CFAP99D6REC4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CFAP99D6REC4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.82■□□□□ 0.92
CFAP99D6REC4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CFAP99D6REC4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.82■□□□□ 0.92
CFAP99D6REC4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms