Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TVP23AA6NH52 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TVP23AA6NH52 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.69■□□□□ 0.58
TVP23AA6NH52 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TVP23AA6NH52 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TVP23AA6NH52 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.69■□□□□ 0.58
TVP23AA6NH52 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TVP23AA6NH52 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.69■□□□□ 0.58
TVP23AA6NH52 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TVP23AA6NH52 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TVP23AA6NH52 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TVP23AA6NH52 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TVP23AA6NH52 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TVP23AA6NH52 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TVP23AA6NH52 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TVP23AA6NH52 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.69■□□□□ 0.58
TVP23AA6NH52 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TVP23AA6NH52 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TVP23AA6NH52 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TVP23AA6NH52 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.68■□□□□ 0.58
TVP23AA6NH52 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TVP23AA6NH52 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TVP23AA6NH52 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.68■□□□□ 0.58
TVP23AA6NH52 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.68■□□□□ 0.58
TVP23AA6NH52 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.68■□□□□ 0.58
TVP23AA6NH52 AC105233.4-201ENST00000642045 216 ntBASIC18.68■□□□□ 0.58
TVP23AA6NH52 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
TVP23AA6NH52 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TVP23AA6NH52 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TVP23AA6NH52 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TVP23AA6NH52 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TVP23AA6NH52 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.68■□□□□ 0.58
TVP23AA6NH52 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TVP23AA6NH52 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TVP23AA6NH52 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TVP23AA6NH52 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TVP23AA6NH52 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TVP23AA6NH52 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TVP23AA6NH52 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TVP23AA6NH52 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
TVP23AA6NH52 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
TVP23AA6NH52 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.67■□□□□ 0.58
TVP23AA6NH52 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.67■□□□□ 0.58
TVP23AA6NH52 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TVP23AA6NH52 AC073130.3-201ENST00000624389 2278 ntBASIC18.67■□□□□ 0.58
TVP23AA6NH52 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TVP23AA6NH52 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TVP23AA6NH52 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TVP23AA6NH52 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TVP23AA6NH52 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TVP23AA6NH52 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TVP23AA6NH52 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
TVP23AA6NH52 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.66■□□□□ 0.58
TVP23AA6NH52 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TVP23AA6NH52 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TVP23AA6NH52 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TVP23AA6NH52 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TVP23AA6NH52 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.66■□□□□ 0.58
TVP23AA6NH52 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TVP23AA6NH52 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TVP23AA6NH52 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.66■□□□□ 0.58
TVP23AA6NH52 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.66■□□□□ 0.58
TVP23AA6NH52 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.66■□□□□ 0.58
TVP23AA6NH52 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.66■□□□□ 0.58
TVP23AA6NH52 AC027682.1-201ENST00000562846 899 ntBASIC18.66■□□□□ 0.58
TVP23AA6NH52 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.66■□□□□ 0.58
TVP23AA6NH52 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.66■□□□□ 0.58
TVP23AA6NH52 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TVP23AA6NH52 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.66■□□□□ 0.58
TVP23AA6NH52 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.66■□□□□ 0.58
TVP23AA6NH52 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TVP23AA6NH52 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TVP23AA6NH52 AC009237.3-201ENST00000393279 1427 ntBASIC18.66■□□□□ 0.58
TVP23AA6NH52 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.66■□□□□ 0.58
TVP23AA6NH52 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TVP23AA6NH52 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TVP23AA6NH52 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TVP23AA6NH52 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TVP23AA6NH52 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TVP23AA6NH52 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TVP23AA6NH52 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TVP23AA6NH52 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TVP23AA6NH52 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TVP23AA6NH52 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.65■□□□□ 0.58
TVP23AA6NH52 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.65■□□□□ 0.58
TVP23AA6NH52 AC106739.1-201ENST00000617035 715 ntBASIC18.65■□□□□ 0.58
TVP23AA6NH52 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TVP23AA6NH52 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.65■□□□□ 0.58
TVP23AA6NH52 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.65■□□□□ 0.58
TVP23AA6NH52 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TVP23AA6NH52 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.65■□□□□ 0.58
TVP23AA6NH52 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TVP23AA6NH52 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TVP23AA6NH52 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
TVP23AA6NH52 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.64■□□□□ 0.58
TVP23AA6NH52 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TVP23AA6NH52 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TVP23AA6NH52 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.64■□□□□ 0.57
TVP23AA6NH52 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TVP23AA6NH52 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms