Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AL121832.2-201ENST00000610979 668 ntBASIC31.26■■■□□ 2.6
HFM1A2PYH4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
HFM1A2PYH4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC31.26■■■□□ 2.59
HFM1A2PYH4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC31.26■■■□□ 2.59
HFM1A2PYH4 AC244015.2-201ENST00000616358 1861 ntBASIC31.26■■■□□ 2.59
HFM1A2PYH4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC31.26■■■□□ 2.59
HFM1A2PYH4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC31.26■■■□□ 2.59
HFM1A2PYH4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
HFM1A2PYH4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
HFM1A2PYH4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
HFM1A2PYH4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
HFM1A2PYH4 TSPY6P-201ENST00000448518 926 ntBASIC31.25■■■□□ 2.59
HFM1A2PYH4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
HFM1A2PYH4 MARS-234ENST00000630571 216 ntTSL 5 BASIC31.25■■■□□ 2.59
HFM1A2PYH4 MARS-235ENST00000630803 183 ntTSL 3 BASIC31.25■■■□□ 2.59
HFM1A2PYH4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
HFM1A2PYH4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
HFM1A2PYH4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC31.25■■■□□ 2.59
HFM1A2PYH4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC31.25■■■□□ 2.59
HFM1A2PYH4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
HFM1A2PYH4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
HFM1A2PYH4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC31.24■■■□□ 2.59
HFM1A2PYH4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
HFM1A2PYH4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
HFM1A2PYH4 AC245052.3-201ENST00000450182 901 ntBASIC31.24■■■□□ 2.59
HFM1A2PYH4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC31.24■■■□□ 2.59
HFM1A2PYH4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC31.24■■■□□ 2.59
HFM1A2PYH4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC31.24■■■□□ 2.59
HFM1A2PYH4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
HFM1A2PYH4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
HFM1A2PYH4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
HFM1A2PYH4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
HFM1A2PYH4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
HFM1A2PYH4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
HFM1A2PYH4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
HFM1A2PYH4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC31.24■■■□□ 2.59
HFM1A2PYH4 AC142086.2-201ENST00000569753 217 ntBASIC31.24■■■□□ 2.59
HFM1A2PYH4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
HFM1A2PYH4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
HFM1A2PYH4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC31.23■■■□□ 2.59
HFM1A2PYH4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
HFM1A2PYH4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
HFM1A2PYH4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC31.23■■■□□ 2.59
HFM1A2PYH4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
HFM1A2PYH4 GPX1P1-201ENST00000388829 606 ntBASIC31.23■■■□□ 2.59
HFM1A2PYH4 AC016405.3-201ENST00000607710 860 ntBASIC31.23■■■□□ 2.59
HFM1A2PYH4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC31.23■■■□□ 2.59
HFM1A2PYH4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC31.23■■■□□ 2.59
HFM1A2PYH4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
HFM1A2PYH4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
HFM1A2PYH4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC31.22■■■□□ 2.59
HFM1A2PYH4 AL109923.1-201ENST00000618799 583 ntBASIC31.22■■■□□ 2.59
HFM1A2PYH4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC31.22■■■□□ 2.59
HFM1A2PYH4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC31.21■■■□□ 2.59
HFM1A2PYH4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
HFM1A2PYH4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC31.21■■■□□ 2.59
HFM1A2PYH4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC31.21■■■□□ 2.59
HFM1A2PYH4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC31.21■■■□□ 2.59
HFM1A2PYH4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
HFM1A2PYH4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
HFM1A2PYH4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC31.21■■■□□ 2.59
HFM1A2PYH4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC31.2■■■□□ 2.59
HFM1A2PYH4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC31.2■■■□□ 2.59
HFM1A2PYH4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
HFM1A2PYH4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
HFM1A2PYH4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
HFM1A2PYH4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
HFM1A2PYH4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC31.19■■■□□ 2.58
HFM1A2PYH4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
HFM1A2PYH4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC31.19■■■□□ 2.58
HFM1A2PYH4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
HFM1A2PYH4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
HFM1A2PYH4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
HFM1A2PYH4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
HFM1A2PYH4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC31.18■■■□□ 2.58
HFM1A2PYH4 AC093787.1-201ENST00000450396 207 ntBASIC31.18■■■□□ 2.58
HFM1A2PYH4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC31.18■■■□□ 2.58
HFM1A2PYH4 OR10C1-204ENST00000622521 1039 ntBASIC31.18■■■□□ 2.58
HFM1A2PYH4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
HFM1A2PYH4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
HFM1A2PYH4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
HFM1A2PYH4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
HFM1A2PYH4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
HFM1A2PYH4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC31.17■■■□□ 2.58
HFM1A2PYH4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
HFM1A2PYH4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC31.17■■■□□ 2.58
HFM1A2PYH4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
HFM1A2PYH4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC31.17■■■□□ 2.58
HFM1A2PYH4 AC083906.2-201ENST00000511578 360 ntBASIC31.17■■■□□ 2.58
HFM1A2PYH4 AL591742.1-201ENST00000604433 565 ntBASIC31.17■■■□□ 2.58
HFM1A2PYH4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
HFM1A2PYH4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC31.17■■■□□ 2.58
HFM1A2PYH4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC31.17■■■□□ 2.58
HFM1A2PYH4 AF201337.1-201ENST00000520239 748 ntBASIC31.16■■■□□ 2.58
HFM1A2PYH4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC31.16■■■□□ 2.58
HFM1A2PYH4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
HFM1A2PYH4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC31.16■■■□□ 2.58
HFM1A2PYH4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC31.16■■■□□ 2.58
HFM1A2PYH4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
HFM1A2PYH4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC31.16■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms