Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC15.16■□□□□ 0.02
IGHV4-28A0A0C4DH34 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
IGHV4-28A0A0C4DH34 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC15.16■□□□□ 0.02
IGHV4-28A0A0C4DH34 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC15.16■□□□□ 0.02
IGHV4-28A0A0C4DH34 RAP2CP1-201ENST00000605103 478 ntBASIC15.16■□□□□ 0.02
IGHV4-28A0A0C4DH34 AC010536.3-201ENST00000620306 533 ntBASIC15.16■□□□□ 0.02
IGHV4-28A0A0C4DH34 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC15.16■□□□□ 0.02
IGHV4-28A0A0C4DH34 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
IGHV4-28A0A0C4DH34 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IGHV4-28A0A0C4DH34 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
IGHV4-28A0A0C4DH34 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IGHV4-28A0A0C4DH34 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IGHV4-28A0A0C4DH34 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IGHV4-28A0A0C4DH34 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
IGHV4-28A0A0C4DH34 AL117328.2-201ENST00000624617 1940 ntBASIC15.15■□□□□ 0.02
IGHV4-28A0A0C4DH34 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IGHV4-28A0A0C4DH34 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC15.15■□□□□ 0.02
IGHV4-28A0A0C4DH34 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IGHV4-28A0A0C4DH34 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IGHV4-28A0A0C4DH34 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IGHV4-28A0A0C4DH34 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC15.15■□□□□ 0.02
IGHV4-28A0A0C4DH34 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
IGHV4-28A0A0C4DH34 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
IGHV4-28A0A0C4DH34 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.15■□□□□ 0.02
IGHV4-28A0A0C4DH34 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC15.15■□□□□ 0.02
IGHV4-28A0A0C4DH34 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IGHV4-28A0A0C4DH34 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC15.15■□□□□ 0.02
IGHV4-28A0A0C4DH34 AC061975.6-201ENST00000579045 1553 ntBASIC15.15■□□□□ 0.02
IGHV4-28A0A0C4DH34 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
IGHV4-28A0A0C4DH34 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IGHV4-28A0A0C4DH34 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IGHV4-28A0A0C4DH34 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IGHV4-28A0A0C4DH34 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IGHV4-28A0A0C4DH34 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IGHV4-28A0A0C4DH34 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC15.14■□□□□ 0.01
IGHV4-28A0A0C4DH34 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC15.14■□□□□ 0.01
IGHV4-28A0A0C4DH34 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IGHV4-28A0A0C4DH34 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IGHV4-28A0A0C4DH34 MIR663A-201ENST00000385250 93 ntBASIC15.14■□□□□ 0.01
IGHV4-28A0A0C4DH34 BMP1-204ENST00000397814 836 ntTSL 4 BASIC15.14■□□□□ 0.01
IGHV4-28A0A0C4DH34 AC007322.1-201ENST00000426983 750 ntBASIC15.14■□□□□ 0.01
IGHV4-28A0A0C4DH34 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC15.14■□□□□ 0.01
IGHV4-28A0A0C4DH34 TK2-208ENST00000545043 1120 ntTSL 2 BASIC15.14■□□□□ 0.01
IGHV4-28A0A0C4DH34 DUX4L16-201ENST00000555130 1264 ntBASIC15.14■□□□□ 0.01
IGHV4-28A0A0C4DH34 SLC7A5P1-201ENST00000568957 537 ntBASIC15.14■□□□□ 0.01
IGHV4-28A0A0C4DH34 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC15.14■□□□□ 0.01
IGHV4-28A0A0C4DH34 MAZ-216ENST00000616501 991 ntTSL 5 BASIC15.14■□□□□ 0.01
IGHV4-28A0A0C4DH34 AC231657.2-201ENST00000624556 255 ntBASIC15.14■□□□□ 0.01
IGHV4-28A0A0C4DH34 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IGHV4-28A0A0C4DH34 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IGHV4-28A0A0C4DH34 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IGHV4-28A0A0C4DH34 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
IGHV4-28A0A0C4DH34 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
IGHV4-28A0A0C4DH34 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC15.14■□□□□ 0.01
IGHV4-28A0A0C4DH34 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IGHV4-28A0A0C4DH34 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC15.13■□□□□ 0.01
IGHV4-28A0A0C4DH34 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
IGHV4-28A0A0C4DH34 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
IGHV4-28A0A0C4DH34 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IGHV4-28A0A0C4DH34 LSR-203ENST00000360798 1963 ntTSL 2 BASIC15.13■□□□□ 0.01
IGHV4-28A0A0C4DH34 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IGHV4-28A0A0C4DH34 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IGHV4-28A0A0C4DH34 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
IGHV4-28A0A0C4DH34 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
IGHV4-28A0A0C4DH34 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
IGHV4-28A0A0C4DH34 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC15.13■□□□□ 0.01
IGHV4-28A0A0C4DH34 KRT16P2-201ENST00000414673 1423 ntBASIC15.13■□□□□ 0.01
IGHV4-28A0A0C4DH34 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
IGHV4-28A0A0C4DH34 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC15.13■□□□□ 0.01
IGHV4-28A0A0C4DH34 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC15.13■□□□□ 0.01
IGHV4-28A0A0C4DH34 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
IGHV4-28A0A0C4DH34 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IGHV4-28A0A0C4DH34 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
IGHV4-28A0A0C4DH34 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC15.13■□□□□ 0.01
IGHV4-28A0A0C4DH34 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
IGHV4-28A0A0C4DH34 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IGHV4-28A0A0C4DH34 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IGHV4-28A0A0C4DH34 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
IGHV4-28A0A0C4DH34 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IGHV4-28A0A0C4DH34 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IGHV4-28A0A0C4DH34 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
IGHV4-28A0A0C4DH34 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC15.12■□□□□ 0.01
IGHV4-28A0A0C4DH34 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
IGHV4-28A0A0C4DH34 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC15.12■□□□□ 0.01
IGHV4-28A0A0C4DH34 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
IGHV4-28A0A0C4DH34 CROCCP5-201ENST00000436658 830 ntBASIC15.12■□□□□ 0.01
IGHV4-28A0A0C4DH34 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC15.12■□□□□ 0.01
IGHV4-28A0A0C4DH34 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC15.12■□□□□ 0.01
IGHV4-28A0A0C4DH34 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.12■□□□□ 0.01
IGHV4-28A0A0C4DH34 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
IGHV4-28A0A0C4DH34 GXYLT1P5-201ENST00000614548 1189 ntBASIC15.12■□□□□ 0.01
IGHV4-28A0A0C4DH34 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
IGHV4-28A0A0C4DH34 C11orf96-202ENST00000528572 1834 ntBASIC15.12■□□□□ 0.01
IGHV4-28A0A0C4DH34 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
IGHV4-28A0A0C4DH34 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
IGHV4-28A0A0C4DH34 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
IGHV4-28A0A0C4DH34 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
IGHV4-28A0A0C4DH34 AC138932.1-201ENST00000534164 6830 ntBASIC15.12■□□□□ 0.01
IGHV4-28A0A0C4DH34 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
IGHV4-28A0A0C4DH34 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms