Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV21A0A0B4J279 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV21A0A0B4J279 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
TRAV21A0A0B4J279 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV21A0A0B4J279 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV21A0A0B4J279 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV21A0A0B4J279 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV21A0A0B4J279 AC073130.3-201ENST00000624389 2278 ntBASIC15.55■□□□□ 0.08
TRAV21A0A0B4J279 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV21A0A0B4J279 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV21A0A0B4J279 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV21A0A0B4J279 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
TRAV21A0A0B4J279 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV21A0A0B4J279 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV21A0A0B4J279 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV21A0A0B4J279 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV21A0A0B4J279 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TRAV21A0A0B4J279 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV21A0A0B4J279 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV21A0A0B4J279 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV21A0A0B4J279 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC15.55■□□□□ 0.08
TRAV21A0A0B4J279 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC15.55■□□□□ 0.08
TRAV21A0A0B4J279 TRIR-202ENST00000588213 841 ntTSL 3 BASIC15.55■□□□□ 0.08
TRAV21A0A0B4J279 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
TRAV21A0A0B4J279 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TRAV21A0A0B4J279 AL157384.1-201ENST00000445995 2473 ntBASIC15.55■□□□□ 0.08
TRAV21A0A0B4J279 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRAV21A0A0B4J279 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRAV21A0A0B4J279 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV21A0A0B4J279 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRAV21A0A0B4J279 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV21A0A0B4J279 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV21A0A0B4J279 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV21A0A0B4J279 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV21A0A0B4J279 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRAV21A0A0B4J279 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV21A0A0B4J279 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV21A0A0B4J279 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC15.54■□□□□ 0.08
TRAV21A0A0B4J279 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV21A0A0B4J279 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV21A0A0B4J279 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRAV21A0A0B4J279 SNX3-202ENST00000349379 890 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV21A0A0B4J279 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV21A0A0B4J279 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV21A0A0B4J279 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV21A0A0B4J279 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV21A0A0B4J279 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV21A0A0B4J279 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV21A0A0B4J279 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV21A0A0B4J279 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV21A0A0B4J279 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV21A0A0B4J279 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV21A0A0B4J279 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV21A0A0B4J279 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV21A0A0B4J279 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV21A0A0B4J279 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV21A0A0B4J279 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRAV21A0A0B4J279 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV21A0A0B4J279 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV21A0A0B4J279 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV21A0A0B4J279 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV21A0A0B4J279 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV21A0A0B4J279 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
TRAV21A0A0B4J279 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV21A0A0B4J279 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV21A0A0B4J279 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAV21A0A0B4J279 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV21A0A0B4J279 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV21A0A0B4J279 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV21A0A0B4J279 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV21A0A0B4J279 MIR4466-201ENST00000606121 54 ntBASIC15.53■□□□□ 0.08
TRAV21A0A0B4J279 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAV21A0A0B4J279 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV21A0A0B4J279 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
TRAV21A0A0B4J279 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV21A0A0B4J279 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAV21A0A0B4J279 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV21A0A0B4J279 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV21A0A0B4J279 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV21A0A0B4J279 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV21A0A0B4J279 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TRAV21A0A0B4J279 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAV21A0A0B4J279 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV21A0A0B4J279 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV21A0A0B4J279 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TRAV21A0A0B4J279 NARF-205ENST00000412079 1760 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAV21A0A0B4J279 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV21A0A0B4J279 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TRAV21A0A0B4J279 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
TRAV21A0A0B4J279 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV21A0A0B4J279 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV21A0A0B4J279 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAV21A0A0B4J279 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV21A0A0B4J279 STX5-203ENST00000394690 1568 ntTSL 5 BASIC15.52■□□□□ 0.07
TRAV21A0A0B4J279 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TRAV21A0A0B4J279 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC15.52■□□□□ 0.07
TRAV21A0A0B4J279 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV21A0A0B4J279 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV21A0A0B4J279 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV21A0A0B4J279 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms